/*========================================================================= * * Copyright NumFOCUS * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. * You may obtain a copy of the License at * * http://www.apache.org/licenses/LICENSE-2.0.txt * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * See the License for the specific language governing permissions and * limitations under the License. * *=========================================================================*/ #include "itkBSplineSmoothingOnUpdateDisplacementFieldTransform.h" #include "itkBSplineSmoothingOnUpdateDisplacementFieldTransformParametersAdaptor.h" int itkBSplineSmoothingOnUpdateDisplacementFieldTransformParametersAdaptorTest(int, char *[]) { constexpr unsigned int SpaceDimension = 3; using CoordinateRepType = double; using TransformType = itk::BSplineSmoothingOnUpdateDisplacementFieldTransform; /** * Define the transformation domain */ using PointType = TransformType::PointType; PointType origin; origin.Fill(-5.0); using SizeType = TransformType::SizeType; SizeType size; size.Fill(65); using SpacingType = TransformType::SpacingType; SpacingType spacing; spacing.Fill(1.2); using DirectionType = TransformType::DirectionType; DirectionType direction; direction.SetIdentity(); using DisplacementFieldType = TransformType::DisplacementFieldType; DisplacementFieldType::Pointer displacementField = DisplacementFieldType::New(); displacementField->SetOrigin(origin); displacementField->SetSpacing(spacing); displacementField->SetRegions(size); displacementField->SetDirection(direction); displacementField->Allocate(); TransformType::OutputVectorType zeroVector; zeroVector.Fill(0); displacementField->FillBuffer(zeroVector); TransformType::OutputVectorType nonzeroVector; nonzeroVector.Fill(10.3); DisplacementFieldType::IndexType index; index.Fill(40); displacementField->SetPixel(index, nonzeroVector); /** * Instantiate a transform */ std::cout << "Initialize transform." << std::endl; TransformType::Pointer transform = TransformType::New(); transform->SetDisplacementField(displacementField); TransformType::InputPointType point; point.Fill(50.0); TransformType::OutputPointType outputPointBeforeAdapt = transform->TransformPoint(point); SpacingType spacingBefore = transform->GetDisplacementField()->GetSpacing(); SizeType sizeBefore = transform->GetDisplacementField()->GetLargestPossibleRegion().GetSize(); /** * Instantiate the adaptor * we keep the transform domain definition the same except we increase * the size and decrease the spacing. */ std::cout << "Instantiate adaptor." << std::endl; SpacingType requiredSpacing; requiredSpacing.Fill(0.6); SizeType requiredSize; for (unsigned int d = 0; d < SpaceDimension; d++) { requiredSize[d] = static_cast((spacing[d] * (size[d] - 1) / requiredSpacing[d]) + 1); } using AdaptorType = itk::BSplineSmoothingOnUpdateDisplacementFieldTransformParametersAdaptor; AdaptorType::Pointer adaptor = AdaptorType::New(); adaptor->SetTransform(transform); adaptor->SetRequiredSize(requiredSize); adaptor->SetRequiredSpacing(requiredSpacing); adaptor->SetRequiredOrigin(displacementField->GetOrigin()); adaptor->SetRequiredDirection(displacementField->GetDirection()); AdaptorType::ArrayType updateMeshSize; AdaptorType::ArrayType totalMeshSize; updateMeshSize.Fill(10); totalMeshSize.Fill(0); adaptor->SetMeshSizeForTheUpdateField(updateMeshSize); adaptor->SetMeshSizeForTheTotalField(totalMeshSize); try { adaptor->AdaptTransformParameters(); } catch (...) { std::cerr << "Error in adapting transform." << std::endl; return EXIT_FAILURE; } SpacingType spacingAfter = transform->GetDisplacementField()->GetSpacing(); SizeType sizeAfter = transform->GetDisplacementField()->GetLargestPossibleRegion().GetSize(); std::cout << "Spacing: " << spacingBefore << "(before), " << spacingAfter << "(after)." << std::endl; std::cout << "Size: " << sizeBefore << "(before), " << sizeAfter << "(after)." << std::endl; TransformType::ParametersType fixedParameters = adaptor->GetRequiredFixedParameters(); std::cout << "Fixed parameters: " << fixedParameters << std::endl; adaptor->SetRequiredFixedParameters(fixedParameters); if (adaptor->GetRequiredSize() != transform->GetDisplacementField()->GetLargestPossibleRegion().GetSize()) { std::cerr << "required size conversion is incorrect." << std::endl; return EXIT_FAILURE; } if (adaptor->GetRequiredSpacing() != transform->GetDisplacementField()->GetSpacing()) { std::cerr << "required spacing conversion is incorrect." << std::endl; return EXIT_FAILURE; } if (adaptor->GetRequiredOrigin() != transform->GetDisplacementField()->GetOrigin()) { std::cerr << "required origin conversion is incorrect." << std::endl; return EXIT_FAILURE; } if (adaptor->GetRequiredDirection() != transform->GetDisplacementField()->GetDirection()) { std::cerr << "required direction conversion is incorrect." << std::endl; return EXIT_FAILURE; } if (adaptor->GetNumberOfControlPointsForTheUpdateField() != transform->GetNumberOfControlPointsForTheUpdateField()) { std::cerr << "update field mesh conversion is incorrect." << std::endl; return EXIT_FAILURE; } if (adaptor->GetNumberOfControlPointsForTheTotalField() != transform->GetNumberOfControlPointsForTheTotalField()) { std::cerr << "total field mesh conversion is incorrect." << std::endl; return EXIT_FAILURE; } TransformType::OutputPointType outputPointAfterAdapt = transform->TransformPoint(point); std::cout << point << " to (before) " << outputPointBeforeAdapt << std::endl; std::cout << point << " to (after) " << outputPointAfterAdapt << std::endl; if (outputPointBeforeAdapt.EuclideanDistanceTo(outputPointAfterAdapt) > 1e-6) { std::cerr << "output points don't match up before and after adapt call." << std::endl; return EXIT_FAILURE; } adaptor->Print(std::cout, 5); return EXIT_SUCCESS; }