/*=========================================================================
 *
 *  Copyright NumFOCUS
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         https://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/

#include <algorithm>

#include "itksys/SystemTools.hxx"
#include "itksys/Directory.hxx"
#include "itksys/RegularExpression.hxx"
#include "itkRegularExpressionSeriesFileNames.h"

struct lt_pair_numeric_string_string
{
  bool
  operator()(const std::pair<std::string, std::string> & s1, const std::pair<std::string, std::string> & s2) const
  {
    return std::stod(s1.second.c_str()) < std::stod(s2.second.c_str());
  }
};

struct lt_pair_alphabetic_string_string
{
  bool
  operator()(const std::pair<std::string, std::string> & s1, const std::pair<std::string, std::string> & s2) const
  {
    return s1.second < s2.second;
  }
};

namespace itk
{
const std::vector<std::string> &
RegularExpressionSeriesFileNames::GetFileNames()
{
  // Validate the ivars
  if (m_Directory.empty())
  {
    itkExceptionMacro("No directory defined!");
  }

  itksys::RegularExpression reg;
  if (!reg.compile(m_RegularExpression.c_str()))
  {
    itkExceptionMacro("Error compiling regular expression " << m_RegularExpression);
  }

  // Process all files in the directory
  itksys::Directory fileDir;
  if (!fileDir.Load(m_Directory.c_str()))
  {
    itkExceptionMacro("Directory " << m_Directory.c_str() << " cannot be read!");
  }

  std::vector<std::pair<std::string, std::string>> sortedBySubMatch;

  // Scan directory for files. Each file is checked to see if it
  // matches the m_RegularExpression.
  for (unsigned long i = 0; i < fileDir.GetNumberOfFiles(); ++i)
  {
    // Only read files
    if (itksys::SystemTools::FileIsDirectory((m_Directory + "/" + fileDir.GetFile(i)).c_str()))
    {
      continue;
    }

    if (reg.find(fileDir.GetFile(i)))
    {
      // Store the full filename and the selected sub expression match
      std::pair<std::string, std::string> fileNameMatch;
      fileNameMatch.first = m_Directory + "/" + fileDir.GetFile(i);
      fileNameMatch.second = reg.match(m_SubMatch);
      sortedBySubMatch.push_back(fileNameMatch);
    }
  }

  // Sort the files. The files are sorted by the sub match defined by
  // m_SubMatch. Sorting can be alpahbetic or numeric.
  if (m_NumericSort)
  {
    std::sort(sortedBySubMatch.begin(), sortedBySubMatch.end(), lt_pair_numeric_string_string());
  }
  else
  {
    std::sort(sortedBySubMatch.begin(), sortedBySubMatch.end(), lt_pair_alphabetic_string_string());
  }

  // Now, store the sorted names in a vector
  m_FileNames.clear();
  std::vector<std::pair<std::string, std::string>>::iterator siter;
  for (siter = sortedBySubMatch.begin(); siter != sortedBySubMatch.end(); ++siter)
  {
    m_FileNames.push_back(siter->first);
  }

  return m_FileNames;
}

void
RegularExpressionSeriesFileNames::PrintSelf(std::ostream & os, Indent indent) const
{
  Superclass::PrintSelf(os, indent);

  os << indent << "Directory: " << m_Directory << std::endl;
  os << indent << "SubMatch: " << m_SubMatch << std::endl;
  os << indent << "NumericSort: " << m_NumericSort << std::endl;
  os << indent << "RegularExpression: " << m_RegularExpression << std::endl;

  for (unsigned int i = 0; i < m_FileNames.size(); ++i)
  {
    os << indent << "FileNames[" << i << "]: " << m_FileNames[i] << std::endl;
  }
}
} // namespace itk