/*========================================================================= * * Copyright NumFOCUS * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. * You may obtain a copy of the License at * * https://www.apache.org/licenses/LICENSE-2.0.txt * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * See the License for the specific language governing permissions and * limitations under the License. * *=========================================================================*/ #include "itkImageFileWriter.h" #include "itkImageFileReader.h" #include "itkTimeProbesCollectorBase.h" #include "itkTestingMacros.h" namespace { template int ActualTest(std::string filename, typename TImageType::SizeType size) { using ImageType = TImageType; using PixelType = typename ImageType::PixelType; using WriterType = itk::ImageFileWriter; using ReaderType = itk::ImageFileReader; using IteratorType = itk::ImageRegionIterator; using ConstIteratorType = itk::ImageRegionConstIterator; typename ImageType::RegionType region; typename ImageType::IndexType index; itk::TimeProbesCollectorBase chronometer; { // begin write block auto image = ImageType::New(); index.Fill(0); region.SetSize(size); region.SetIndex(index); image->SetRegions(region); size_t numberOfPixels = 1; for (unsigned int i = 0; i < ImageType::ImageDimension; ++i) { numberOfPixels *= region.GetSize(i); } const size_t sizeInMebiBytes = sizeof(PixelType) * numberOfPixels / (1024 * 1024); std::cout << "Trying to allocate an image of size " << sizeInMebiBytes << " MiB " << std::endl; chronometer.Start("Allocate"); image->Allocate(); chronometer.Stop("Allocate"); std::cout << "Initializing pixel values " << std::endl; IteratorType itr(image, region); itr.GoToBegin(); PixelType pixelValue{}; chronometer.Start("Initializing"); while (!itr.IsAtEnd()) { itr.Set(pixelValue); ++pixelValue; ++itr; } chronometer.Stop("Initializing"); std::cout << "Trying to write the image to disk" << std::endl; try { auto writer = WriterType::New(); writer->SetInput(image); writer->SetFileName(filename); chronometer.Start("Write"); writer->Update(); chronometer.Stop("Write"); } catch (const itk::ExceptionObject & ex) { std::cout << ex << std::endl; return EXIT_FAILURE; } } // end write block to free the memory std::cout << "Trying to read the image back from disk" << std::endl; auto reader = ReaderType::New(); reader->SetFileName(filename); try { chronometer.Start("Read"); reader->Update(); chronometer.Stop("Read"); } catch (const itk::ExceptionObject & ex) { std::cout << ex << std::endl; return EXIT_FAILURE; } typename ImageType::ConstPointer readImage = reader->GetOutput(); ConstIteratorType ritr(readImage, region); // IteratorType oitr( image, region ); ritr.GoToBegin(); // oitr.GoToBegin(); std::cout << "Comparing the pixel values..." << std::endl; PixelType pixelValue{}; chronometer.Start("Compare"); while (!ritr.IsAtEnd()) { // if( ( oitr.Get() != ritr.Get() ) || ( oitr.Get() != pixelValue ) ) if (ritr.Get() != pixelValue) { std::cerr << "Pixel comparison failed at index = " << ritr.GetIndex() << std::endl; std::cerr << "Expected pixel value " << pixelValue << std::endl; // std::cerr << "Original Image pixel value " << oitr.Get() << std::endl; std::cerr << "Read Image pixel value " << ritr.Get() << std::endl; return EXIT_FAILURE; } ++pixelValue; // ++oitr; ++ritr; } chronometer.Stop("Compare"); chronometer.Report(std::cout); std::cout << std::endl; std::cout << "Test PASSED !" << std::endl; return EXIT_SUCCESS; } } // namespace int itkLargeImageWriteReadTest(int argc, char * argv[]) { if (argc < 3) { std::cout << "Usage: " << itkNameOfTestExecutableMacro(argv) << " outputFileName numberOfPixelsInOneDimension [numberOfZslices]" << std::endl; return EXIT_FAILURE; } const std::string filename = argv[1]; if (argc == 3) { constexpr unsigned int Dimension = 2; using PixelType = unsigned short; using ImageType = itk::Image; ImageType::SizeType size; size.Fill(atol(argv[2])); return ActualTest(filename, size); } else { constexpr unsigned int Dimension = 3; using PixelType = unsigned short; using ImageType = itk::Image; ImageType::SizeType size; size.Fill(atol(argv[2])); size[2] = atol(argv[3]); return ActualTest(filename, size); } }