/*========================================================================= * * Copyright NumFOCUS * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. * You may obtain a copy of the License at * * https://www.apache.org/licenses/LICENSE-2.0.txt * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * See the License for the specific language governing permissions and * limitations under the License. * *=========================================================================*/ #include #include "itkImageFileReader.h" #include "itkMetaImageIO.h" #include "itkTestingMacros.h" // Specific ImageIO test int itkMetaImageIOGzTest(int argc, char * argv[]) { if (argc < 2) { std::cerr << "Usage: " << itkNameOfTestExecutableMacro(argv) << "testDataDirectory" << std::endl; } int result(0); std::cout << "Test whether MetaIO will search for a compressed data file" << std::endl << "if it can't find the uncompressed data file" << std::endl; std::string headerName(argv[1]); headerName += "/GzTest.mhd"; std::ofstream hdr(headerName.c_str()); hdr << "ObjectType = Image" << std::endl << "NDims = 2" << std::endl << "DimSize = 32 32" << std::endl << "ElementType = MET_USHORT" << std::endl << "ElementDataFile = GzTest.raw" << std::endl; hdr.close(); std::string dataName(argv[1]); dataName += "/GzTest.raw.gz"; gzFile compressed = gzopen(dataName.c_str(), "wb"); for (unsigned short i = 0; i < (32 * 32); ++i) { unsigned short pixel = i & 0xff; if (gzwrite(compressed, &pixel, sizeof(pixel)) != sizeof(pixel)) { std::cerr << "Write error for " << dataName << std::endl; break; } } gzclose(compressed); using PixelType = unsigned short; using myImage = itk::Image; itk::ImageFileReader::Pointer reader = itk::ImageFileReader::New(); reader->SetFileName(headerName.c_str()); itk::MetaImageIO::Pointer io = itk::MetaImageIO::New(); reader->SetImageIO(io); try { reader->Update(); } catch (const itk::ExceptionObject & e) { std::cerr << "exception in file reader " << std::endl; std::cerr << e << std::endl; result++; } std::cout << "Test whether absolute path in MetaIO header works" << std::endl; // re-write header headerName = argv[1]; headerName += "/AbsPathTest.mhd"; std::ofstream hdr2(headerName.c_str()); hdr2 << "ObjectType = Image" << std::endl << "NDims = 2" << std::endl << "DimSize = 32 32" << std::endl << "ElementType = MET_USHORT" << std::endl << "CompressedData = True" << std::endl << "ElementDataFile = " << dataName << std::endl; hdr2.close(); reader->SetFileName(headerName.c_str()); try { reader->Update(); } catch (const itk::ExceptionObject & e) { std::cerr << "Test failed " << std::endl; std::cerr << e << std::endl; result++; } return result == 0 ? EXIT_SUCCESS : EXIT_FAILURE; }