/*========================================================================= * * Copyright NumFOCUS * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. * You may obtain a copy of the License at * * https://www.apache.org/licenses/LICENSE-2.0.txt * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * See the License for the specific language governing permissions and * limitations under the License. * *=========================================================================*/ #include #include "itkImageFileReader.h" #include "itkImageFileWriter.h" #include "itkStreamingImageFilter.h" #include "itkMedianImageFilter.h" #include "itkMetaImageIO.h" #include "itkTestingMacros.h" int itkMetaImageStreamingIOTest(int argc, char * argv[]) { if (argc < 3) { std::cerr << "Missing Parameters." << std::endl; std::cerr << "Usage: " << itkNameOfTestExecutableMacro(argv) << " inputFilename outputFilename [numberOfDataPieces]" << std::endl; return EXIT_FAILURE; } // Image types are defined below. using InputPixelType = unsigned char; using OutputPixelType = unsigned char; constexpr unsigned int Dimension = 3; using InputImageType = itk::Image; using OutputImageType = itk::Image; using ReaderType = itk::ImageFileReader; using WriterType = itk::ImageFileWriter; using IOType = itk::MetaImageIO; using FilterType = itk::MedianImageFilter; using StreamingFilterType = itk::StreamingImageFilter; auto filter = FilterType::New(); auto streamer = StreamingFilterType::New(); auto reader = ReaderType::New(); auto writer = WriterType::New(); auto metaIn = IOType::New(); auto metaOut = IOType::New(); reader->SetImageIO(metaIn); writer->SetImageIO(metaOut); const std::string inputFilename = argv[1]; const std::string outputFilename = argv[2]; reader->SetFileName(inputFilename); reader->SetUseStreaming(true); writer->SetFileName(outputFilename); InputImageType::SizeType indexRadius; indexRadius[0] = 1; // radius along x indexRadius[1] = 1; // radius along y indexRadius[2] = 1; // radius along Z filter->SetRadius(indexRadius); // filter->SetInput( reader->GetOutput() ); streamer->SetInput(reader->GetOutput()); writer->SetInput(streamer->GetOutput()); // test streaming check methods if (!metaIn->CanStreamRead()) { std::cerr << "Failed stream read check" << std::endl; return EXIT_FAILURE; } if (!metaOut->CanStreamWrite()) { std::cerr << "Failed stream write check" << std::endl; return EXIT_FAILURE; } // By default we decide to use 4 pieces, but this value can // be changed from the command line. unsigned int numberOfDataPieces = 4; if (argc > 3) { numberOfDataPieces = std::stoi(argv[3]); } streamer->SetNumberOfStreamDivisions(numberOfDataPieces); try { writer->Update(); } catch (const itk::ExceptionObject & err) { std::cerr << "ExceptionObject caught !" << std::endl; std::cerr << err << std::endl; return EXIT_FAILURE; } return EXIT_SUCCESS; }