/*========================================================================= * * Copyright NumFOCUS * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. * You may obtain a copy of the License at * * https://www.apache.org/licenses/LICENSE-2.0.txt * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * See the License for the specific language governing permissions and * limitations under the License. * *=========================================================================*/ #ifndef itkUpdateShiSparseLevelSet_h #define itkUpdateShiSparseLevelSet_h #include "itkImage.h" #include "itkDiscreteLevelSetImage.h" #include "itkShiSparseLevelSetImage.h" #include "itkImageRegionIteratorWithIndex.h" #include "itkShapedNeighborhoodIterator.h" #include "itkNeighborhoodAlgorithm.h" #include "itkLabelMapToLabelImageFilter.h" #include "itkLabelImageToLabelMapFilter.h" namespace itk { /** * \class UpdateShiSparseLevelSet * \brief Base class for updating the Shi representation of level-set function * * \tparam VDimension Dimension of the input space * \tparam TEquationContainer Container of the system of levelset equations * \ingroup ITKLevelSetsv4 */ template class ITK_TEMPLATE_EXPORT UpdateShiSparseLevelSet : public Object { public: ITK_DISALLOW_COPY_AND_MOVE(UpdateShiSparseLevelSet); using Self = UpdateShiSparseLevelSet; using Pointer = SmartPointer; using ConstPointer = SmartPointer; using Superclass = Object; /** Method for creation through object factory */ itkNewMacro(Self); /** \see LightObject::GetNameOfClass() */ itkOverrideGetNameOfClassMacro(UpdateShiSparseLevelSet); static constexpr unsigned int ImageDimension = VDimension; using LevelSetType = ShiSparseLevelSetImage; using LevelSetPointer = typename LevelSetType::Pointer; using LevelSetInputType = typename LevelSetType::InputType; using LevelSetOutputType = typename LevelSetType::OutputType; using LevelSetOffsetType = typename LevelSetType::OffsetType; using LevelSetLabelMapType = typename LevelSetType::LabelMapType; using LevelSetLabelMapPointer = typename LevelSetType::LabelMapPointer; using LevelSetLabelObjectType = typename LevelSetType::LabelObjectType; using LevelSetLabelObjectPointer = typename LevelSetType::LabelObjectPointer; using LevelSetLabelObjectLengthType = typename LevelSetType::LabelObjectLengthType; using LevelSetLabelObjectLineType = typename LevelSetType::LabelObjectLineType; using LevelSetLayerType = typename LevelSetType::LayerType; using LevelSetLayerIterator = typename LevelSetType::LayerIterator; using LevelSetLayerConstIterator = typename LevelSetType::LayerConstIterator; using LevelSetOutputRealType = typename LevelSetType::OutputRealType; using LevelSetLayerMapType = typename LevelSetType::LayerMapType; using LevelSetLayerMapIterator = typename LevelSetType::LayerMapIterator; using LevelSetLayerMapConstIterator = typename LevelSetType::LayerMapConstIterator; using EquationContainerType = TEquationContainer; using EquationContainerPointer = typename EquationContainerType::Pointer; using TermContainerPointer = typename EquationContainerType::TermContainerPointer; itkGetModifiableObjectMacro(OutputLevelSet, LevelSetType); /** Update function for initializing and computing the output level set */ void Update(); /** Set/Get the sparse level set image */ itkSetObjectMacro(InputLevelSet, LevelSetType); itkGetModifiableObjectMacro(InputLevelSet, LevelSetType); /** Set/Get the RMS change for the update */ itkGetMacro(RMSChangeAccumulator, LevelSetOutputRealType); /** Set/Get the Equation container for computing the update */ itkSetObjectMacro(EquationContainer, EquationContainerType); itkGetModifiableObjectMacro(EquationContainer, EquationContainerType); /** Set/Get the current level set id */ itkSetMacro(CurrentLevelSetId, IdentifierType); itkGetMacro(CurrentLevelSetId, IdentifierType); protected: UpdateShiSparseLevelSet(); ~UpdateShiSparseLevelSet() override = default; // output LevelSetPointer m_OutputLevelSet{}; IdentifierType m_CurrentLevelSetId{}; LevelSetOutputRealType m_RMSChangeAccumulator{}; EquationContainerPointer m_EquationContainer{}; using LabelImageType = Image; using LabelImagePointer = typename LabelImageType::Pointer; LabelImagePointer m_InternalImage{}; using NeighborhoodIteratorType = ShapedNeighborhoodIterator; /** Update +1 level set layers by checking the direction of the movement towards -1 */ // this is the same as Procedure 2 // Input is a update image point m_UpdateImage // Input is also ShiSparseLevelSetImagePointer void UpdateLayerPlusOne(); /** Update -1 level set layers by checking the direction of the movement towards +1 */ void UpdateLayerMinusOne(); /** Return true if there is a pixel from the opposite layer (+1 or -1) moving in the same direction */ bool Con(const LevelSetInputType & idx, const LevelSetOutputType & currentStatus, const LevelSetOutputRealType & currentUpdate) const; private: // input LevelSetPointer m_InputLevelSet{}; LevelSetOffsetType m_Offset{}; using NodePairType = std::pair; }; } // namespace itk #ifndef ITK_MANUAL_INSTANTIATION # include "itkUpdateShiSparseLevelSet.hxx" #endif #endif // itkUpdateShiSparseLevelSet_h