/*============================================================================ MetaIO Copyright 2000-2010 Insight Software Consortium Distributed under the OSI-approved BSD License (the "License"); see accompanying file Copyright.txt for details. This software is distributed WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the License for more information. ============================================================================*/ #include "metaTubeGraph.h" #ifdef _MSC_VER # pragma warning(disable : 4702) #endif #if (METAIO_USE_NAMESPACE) namespace METAIO_NAMESPACE { #endif /** MetaTubeGraph Constructors */ MetaTubeGraph::MetaTubeGraph() : MetaObject() { META_DEBUG_PRINT( "MetaTubeGraph()" ); MetaTubeGraph::Clear(); } MetaTubeGraph::MetaTubeGraph(const char * _headerName) : MetaObject() { META_DEBUG_PRINT( "MetaTubeGraph()" ); MetaTubeGraph::Clear(); MetaTubeGraph::Read(_headerName); } MetaTubeGraph::MetaTubeGraph(const MetaTubeGraph * _tube) : MetaObject() { META_DEBUG_PRINT( "MetaTubeGraph()" ); MetaTubeGraph::Clear(); MetaTubeGraph::CopyInfo(_tube); } MetaTubeGraph::MetaTubeGraph(unsigned int dim) : MetaObject(dim) { META_DEBUG_PRINT( "MetaTubeGraph()" ); MetaTubeGraph::Clear(); } /** Destructor */ MetaTubeGraph::~MetaTubeGraph() { // Delete the list of pointers to tubes. auto it = m_PointList.begin(); while (it != m_PointList.end()) { TubeGraphPnt * pnt = *it; ++it; delete pnt; } m_PointList.clear(); MetaObject::M_Destroy(); } // void MetaTubeGraph::PrintInfo() const { MetaObject::PrintInfo(); std::cout << "Root = " << m_Root << std::endl; std::cout << "PointDim = " << m_PointDim << std::endl; std::cout << "NPoints = " << m_NPoints << std::endl; char str[255]; MET_TypeToString(m_ElementType, str); std::cout << "ElementType = " << str << std::endl; } void MetaTubeGraph::CopyInfo(const MetaObject * _object) { MetaObject::CopyInfo(_object); } void MetaTubeGraph::PointDim(const char * pointDim) { strcpy(m_PointDim, pointDim); } const char * MetaTubeGraph::PointDim() const { return m_PointDim; } void MetaTubeGraph::NPoints(int npnt) { m_NPoints = npnt; } int MetaTubeGraph::NPoints() const { return m_NPoints; } void MetaTubeGraph::Root(int root) { m_Root = root; } int MetaTubeGraph::Root() const { return m_Root; } /** Clear tube information */ void MetaTubeGraph::Clear() { META_DEBUG_PRINT( "MetaTubeGraph: Clear" ); MetaObject::Clear(); strcpy(m_ObjectTypeName, "TubeGraph"); // Delete the list of pointers to tubes. auto it = m_PointList.begin(); while (it != m_PointList.end()) { TubeGraphPnt * pnt = *it; ++it; delete pnt; } m_PointList.clear(); m_Root = 0; m_NPoints = 0; strcpy(m_PointDim, "Node r p txx txy txz tyx tyy tyz tzx tzy tzz"); m_ElementType = MET_FLOAT; } /** Set Read fields */ void MetaTubeGraph::M_SetupReadFields() { META_DEBUG_PRINT( "MetaTubeGraph: M_SetupReadFields" ); MetaObject::M_SetupReadFields(); MET_FieldRecordType * mF; mF = new MET_FieldRecordType; MET_InitReadField(mF, "Root", MET_INT, false); m_Fields.push_back(mF); mF = new MET_FieldRecordType; MET_InitReadField(mF, "PointDim", MET_STRING, true); m_Fields.push_back(mF); mF = new MET_FieldRecordType; MET_InitReadField(mF, "NPoints", MET_INT, true); m_Fields.push_back(mF); mF = new MET_FieldRecordType; MET_InitReadField(mF, "Points", MET_NONE, true); mF->terminateRead = true; m_Fields.push_back(mF); } void MetaTubeGraph::M_SetupWriteFields() { MetaObject::M_SetupWriteFields(); MET_FieldRecordType * mF; FieldsContainerType::iterator it; mF = MET_GetFieldRecord("TransformMatrix", &m_Fields); it = m_Fields.begin(); while (it != m_Fields.end()) { if (*it == mF) { m_Fields.erase(it); break; } ++it; } mF = MET_GetFieldRecord("Offset", &m_Fields); it = m_Fields.begin(); while (it != m_Fields.end()) { if (*it == mF) { m_Fields.erase(it); break; } ++it; } mF = MET_GetFieldRecord("ElementSpacing", &m_Fields); it = m_Fields.begin(); while (it != m_Fields.end()) { if (*it == mF) { m_Fields.erase(it); break; } ++it; } mF = MET_GetFieldRecord("CenterOfRotation", &m_Fields); it = m_Fields.begin(); while (it != m_Fields.end()) { if (*it == mF) { m_Fields.erase(it); break; } ++it; } if (m_Root > 0) { mF = new MET_FieldRecordType; MET_InitWriteField(mF, "Root", MET_INT, m_Root); m_Fields.push_back(mF); } if (strlen(m_PointDim) > 0) { mF = new MET_FieldRecordType; MET_InitWriteField(mF, "PointDim", MET_STRING, strlen(m_PointDim), m_PointDim); m_Fields.push_back(mF); } m_NPoints = static_cast(m_PointList.size()); mF = new MET_FieldRecordType; MET_InitWriteField(mF, "NPoints", MET_INT, m_NPoints); m_Fields.push_back(mF); mF = new MET_FieldRecordType; MET_InitWriteField(mF, "Points", MET_NONE); m_Fields.push_back(mF); } bool MetaTubeGraph::M_Read() { META_DEBUG_PRINT( "MetaTubeGraph: M_Read: Loading Header" ); if (!MetaObject::M_Read()) { std::cout << "MetaTubeGraph: M_Read: Error parsing file" << std::endl; return false; } META_DEBUG_PRINT( "MetaTubeGraph: M_Read: Parsing Header" ); MET_FieldRecordType * mF; mF = MET_GetFieldRecord("Root", &m_Fields); if (mF->defined) { m_Root = static_cast(mF->value[0]); } mF = MET_GetFieldRecord("NPoints", &m_Fields); if (mF->defined) { m_NPoints = static_cast(mF->value[0]); } mF = MET_GetFieldRecord("PointDim", &m_Fields); if (mF->defined) { strcpy(m_PointDim, reinterpret_cast(mF->value)); } int i; int posR = -1; int posP = -1; int posTx = -1; int posGraphNode = -1; int pntDim; char ** pntVal = nullptr; MET_StringToWordArray(m_PointDim, &pntDim, &pntVal); META_DEBUG_PRINT( "MetaTubeGraph: Parsing point dim" ); unsigned int j; for (j = 0; j < static_cast(pntDim); j++) { if (!strcmp(pntVal[j], "node") || !strcmp(pntVal[j], "Node")) { posGraphNode = j; } if (!strcmp(pntVal[j], "s") || !strcmp(pntVal[j], "S") || !strcmp(pntVal[j], "r") || !strcmp(pntVal[j], "R") || !strcmp(pntVal[j], "rad") || !strcmp(pntVal[j], "Rad") || !strcmp(pntVal[j], "radius") || !strcmp(pntVal[j], "Radius")) { posR = j; } if (!strcmp(pntVal[j], "p") || !strcmp(pntVal[j], "P")) { posP = j; } if (!strcmp(pntVal[j], "txx")) { posTx = j; } } for (i = 0; i < pntDim; i++) { delete[] pntVal[i]; } delete[] pntVal; float v[30]; if (m_Event) { m_Event->StartReading(static_cast(m_NPoints)); } if (m_BinaryData) { int elementSize; MET_SizeOfType(m_ElementType, &elementSize); int readSize = m_NPoints * pntDim * elementSize; char * _data = new char[readSize]; m_ReadStream->read(_data, readSize); int gc = static_cast(m_ReadStream->gcount()); if (gc != readSize) { std::cout << "MetaLine: m_Read: data not read completely" << std::endl; std::cout << " ideal = " << readSize << " : actual = " << gc << std::endl; delete[] _data; return false; } double td; for (j = 0; j < static_cast(m_NPoints); j++) { auto * pnt = new TubeGraphPnt(m_NDims); MET_ValueToDouble(m_ElementType, _data, posGraphNode, &td); pnt->m_GraphNode = static_cast(td); if (posR != -1) { MET_ValueToDouble(m_ElementType, _data, posR, &td); pnt->m_R = static_cast(td); } if (posP != -1) { MET_ValueToDouble(m_ElementType, _data, posP, &td); pnt->m_P = static_cast(td); } if (posTx != -1) { for (int r = 0; r < m_NDims * m_NDims; r++) { MET_ValueToDouble(m_ElementType, _data, posTx + r, &td); pnt->m_T[r] = static_cast(td); } } m_PointList.push_back(pnt); } delete[] _data; } else { for (j = 0; j < static_cast(m_NPoints); j++) { if (m_Event) { m_Event->SetCurrentIteration(j + 1); } auto * pnt = new TubeGraphPnt(m_NDims); for (int k = 0; k < pntDim; k++) { *m_ReadStream >> v[k]; m_ReadStream->get(); } pnt->m_GraphNode = static_cast(v[posGraphNode]); if (posR != -1) { pnt->m_R = v[posR]; } if (posP != -1) { pnt->m_P = v[posP]; } if (posTx >= 0 && posTx < pntDim) { for (int r = 0; r < m_NDims * m_NDims; r++) { pnt->m_T[r] = v[posTx + r]; } } m_PointList.push_back(pnt); } char c = ' '; while ((c != '\n') && (!m_ReadStream->eof())) { c = static_cast(m_ReadStream->get()); // to avoid unrecognize charactere } } if (m_Event) { m_Event->StopReading(); } return true; } MET_ValueEnumType MetaTubeGraph::ElementType() const { return m_ElementType; } void MetaTubeGraph::ElementType(MET_ValueEnumType _elementType) { m_ElementType = _elementType; } bool MetaTubeGraph::M_Write() { if (!MetaObject::M_Write()) { std::cout << "MetaTubeGraph: M_Read: Error parsing file" << std::endl; return false; } /** Then copy all tubes points */ if (m_BinaryData) { PointListType::const_iterator it = m_PointList.begin(); PointListType::const_iterator itEnd = m_PointList.end(); int elementSize; MET_SizeOfType(m_ElementType, &elementSize); char * data = new char[(m_NDims * m_NDims + 3) * m_NPoints * elementSize]; int i = 0; int d; while (it != itEnd) { MET_DoubleToValue(static_cast((*it)->m_GraphNode), m_ElementType, data, i++); MET_DoubleToValue(static_cast((*it)->m_R), m_ElementType, data, i++); MET_DoubleToValue(static_cast((*it)->m_P), m_ElementType, data, i++); for (d = 0; d < m_NDims * m_NDims; d++) { MET_DoubleToValue(static_cast((*it)->m_T[d]), m_ElementType, data, i++); } ++it; } m_WriteStream->write(data, (m_NDims * m_NDims + 3) * m_NPoints * elementSize); m_WriteStream->write("\n", 1); delete[] data; } else { PointListType::const_iterator it = m_PointList.begin(); PointListType::const_iterator itEnd = m_PointList.end(); int d; while (it != itEnd) { *m_WriteStream << (*it)->m_GraphNode << " "; *m_WriteStream << (*it)->m_R << " "; *m_WriteStream << (*it)->m_P << " "; for (d = 0; d < m_NDims * m_NDims; d++) { *m_WriteStream << (*it)->m_T[d] << " "; } *m_WriteStream << std::endl; ++it; } } return true; } #if (METAIO_USE_NAMESPACE) }; #endif