/*------------------------------------------------------------------------- This software is provided 'as-is', without any express or implied warranty. In no event will the authors be held liable for any damages arising from the use of this software. Permission is granted to anyone to use this software for any purpose, including commercial applications, and to alter it and redistribute it freely, subject to the following restrictions: 1. The origin of this software must not be misrepresented; you must not claim that you wrote the original software. If you use this software in a product, an acknowledgment in the product documentation would be appreciated but is not required. 2. Altered source versions must be plainly marked as such, and must not be misrepresented as being the original software. 3. This notice may not be removed or altered from any source distribution. -------------------------------------------------------------------------*/ #ifndef __SUNPRO_C #ifndef _XOPEN_SOURCE #define _XOPEN_SOURCE 600 #endif #endif #include #include #include #include #include #include #if defined(_WIN32) && !defined(__NUTC__) # include # define ACCESS _access # define UNLINK _unlink #else # include # define ACCESS access # define UNLINK unlink #endif #include #include "cgns_io.h" #include "cgnslib.h" #include "adf/ADF.h" #if CG_BUILD_HDF5 #include "adfh/ADFH.h" char hdf5_access[64] = "NATIVE"; #endif #ifdef MEM_DEBUG #include "cg_malloc.h" #endif #if CG_BUILD_PARALLEL #include MPI_Comm pcg_mpi_comm=MPI_COMM_NULL; int pcg_mpi_comm_size; int pcg_mpi_comm_rank; int pcg_mpi_initialized; MPI_Info pcg_mpi_info; #endif #if CG_HAVE_STAT64_STRUCT #ifdef _WIN32 #define cgns_stat _stat64 #else #define cgns_stat stat64 #endif #else #define cgns_stat stat #endif /* Flag for contiguous or compact HDF5 storage */ extern int HDF5storage_type; typedef struct { int type; int mode; double rootid; } cgns_io; static int num_open = 0; static int num_iolist = 0; static cgns_io *iolist; static char *cgio_ErrorMessage[] = { "no error", "invalid cgio index", "malloc/realloc failed", "unknown file open mode", "invalid file type", "filename is NULL or empty", "character string is too small", "file was not found", "pathname is NULL or empty", "no match for pathname", "error opening file for reading", "file opened in read-only mode", "NULL or empty string", "invalid configure option", "rename of tempfile file failed", "too many open files", "dimensions exceed that for a 32-bit integer", "file has the wrong specified type", "not a HDF5 file - required for parallel" }; #define CGIO_MAX_ERRORS ((int)(sizeof(cgio_ErrorMessage)/sizeof(char *))) #define get_error() last_err static int last_err = CGIO_ERR_NONE; static int last_type = CGIO_FILE_NONE; static int abort_on_error = 0; static int cgio_n_paths = 0; static char **cgio_paths = 0; /*========================================================= * support routines *=========================================================*/ static int set_error (int errcode) { last_err = errcode; if (last_err && abort_on_error) cgio_error_exit(NULL); return last_err; } static cgns_io *get_cgnsio (int cgio_num, int write) { if (--cgio_num < 0 || cgio_num >= num_iolist) { last_err = CGIO_ERR_BAD_CGIO; return NULL; } if (write && iolist[cgio_num].mode == CGIO_MODE_READ) { last_err = CGIO_ERR_READ_ONLY; return NULL; } last_type = iolist[cgio_num].type; last_err = CGIO_ERR_NONE; return &iolist[cgio_num]; } /*---------------------------------------------------------*/ static cglong_t compute_data_size (const char *data_type, int ndims, const cgsize_t *dims) { int size; cglong_t count; size = cgio_compute_data_size (data_type, ndims, dims, &count); return (cglong_t)size * count; } /*---------------------------------------------------------*/ static int recurse_nodes (int input, double InputID, int output, double OutputID, int follow_links, int depth) { int n, nchild, cnt, name_len, file_len; char name[CGIO_MAX_NAME_LENGTH+1]; char *link_name, *link_file; double childID, newID; /* Copy the data from the current input node to the output node */ if (depth && cgio_copy_node(input, InputID, output, OutputID)) return CG_ERROR; /* Loop through the children of the current node */ if (cgio_number_children(input, InputID, &nchild)) return CG_ERROR; for (n = 1; n <= nchild; n++) { if (cgio_children_ids(input, InputID, n, 1, &cnt, &childID) || cgio_get_name(input, childID, name) || cgio_is_link(input, childID, &name_len)) return CG_ERROR; if (name_len) { if (cgio_link_size(input, childID, &file_len, &name_len)) return CG_ERROR; } if (name_len && (file_len == 0 || follow_links == 0)) { link_file = (char *) malloc (file_len + name_len + 2); if (link_file == NULL) { set_error(CGIO_ERR_MALLOC); return CG_ERROR; } link_name = link_file + file_len + 1; if (cgio_get_link(input, childID, link_file, link_name)) { free (link_file); return CG_ERROR; } link_file[file_len] = 0; link_name[name_len] = 0; if (cgio_create_link(output, OutputID, name, link_file, link_name, &newID)) { free (link_file); return CG_ERROR; } free (link_file); } else { if (cgio_create_node(output, OutputID, name, &newID) || recurse_nodes(input, childID, output, newID, follow_links, ++depth)) return CG_ERROR; } } return CG_OK; } /*---------------------------------------------------------*/ static int rewrite_file (int cginp, const char *filename) { int cgout, ierr; cgns_io *input, *output; char *tmpfile, *linkfile = NULL; #ifdef S_IFLNK struct cgns_stat st; #endif input = get_cgnsio(cginp, 0); if (input->mode != CGIO_MODE_READ && cgio_flush_to_disk(cginp)) return get_error(); #ifdef S_IFLNK if (!lstat(filename, &st) && (st.st_mode & S_IFLNK) == S_IFLNK) { int len; linkfile = (char *)malloc(st.st_size + 1); if (linkfile == NULL) return set_error(CGIO_ERR_MALLOC); len = readlink(filename, linkfile, st.st_size + 1); if (len < 0 || len > st.st_size) { free(linkfile); linkfile = NULL; } else { linkfile[len] = 0; } } #endif if (linkfile == NULL) { tmpfile = (char *)malloc(strlen(filename) + 6); if (tmpfile == NULL) return set_error(CGIO_ERR_MALLOC); sprintf(tmpfile, "%s.temp", filename); } else { tmpfile = (char *)malloc(strlen(linkfile) + 6); if (tmpfile == NULL) { free(linkfile); return set_error(CGIO_ERR_MALLOC); } sprintf(tmpfile, "%s.temp", linkfile); } UNLINK(tmpfile); if (cgio_open_file(tmpfile, CGIO_MODE_WRITE, input->type, &cgout)) { UNLINK(tmpfile); free(tmpfile); if (linkfile != NULL) free(linkfile); return get_error(); } output = get_cgnsio(cgout, 0); ierr = recurse_nodes(cginp, input->rootid, cgout, output->rootid, 0, 0); cgio_close_file (cgout); if (ierr) { UNLINK(tmpfile); free(tmpfile); if (linkfile != NULL) free(linkfile); return set_error(ierr); } ierr = CGIO_ERR_NONE; cgio_close_file (cginp); if (linkfile == NULL) { UNLINK(filename); if (rename(tmpfile, filename)) ierr = CGIO_ERR_FILE_RENAME; } else { UNLINK(linkfile); if (rename(tmpfile, linkfile)) ierr = CGIO_ERR_FILE_RENAME; free(linkfile); } free(tmpfile); return set_error(ierr); } /*========================================================= * paths for searching for linked-to files *=========================================================*/ int cgio_path_add (const char *path) { if (path == NULL || !*path) return set_error(CGIO_ERR_NULL_FILE); if (cgio_n_paths) cgio_paths = (char **) realloc (cgio_paths, (cgio_n_paths+1) * sizeof(char *)); else cgio_paths = (char **) malloc (sizeof(char *)); if (cgio_paths == NULL) { cgio_n_paths = 0; return set_error(CGIO_ERR_MALLOC); } cgio_paths[cgio_n_paths] = (char *) malloc (strlen(path)+1); if (cgio_paths[cgio_n_paths] == NULL) return set_error(CGIO_ERR_MALLOC); strcpy(cgio_paths[cgio_n_paths], path); cgio_n_paths++; return set_error(CGIO_ERR_NONE); } /*---------------------------------------------------------*/ int cgio_path_delete (const char *path) { int n; if (cgio_n_paths == 0) { if (path != NULL) return set_error(CGIO_ERR_NO_MATCH); return set_error(CGIO_ERR_NONE); } if (path != NULL) { for (n = 0; n < cgio_n_paths; n++) { if (cgio_paths[n] != NULL && 0 == strcmp(path, cgio_paths[n])) { free(cgio_paths[n]); cgio_paths[n] = NULL; return set_error(CGIO_ERR_NONE); } } return set_error(CGIO_ERR_NO_MATCH); } for (n = 0; n < cgio_n_paths; n++) { if (cgio_paths[n] != NULL) free(cgio_paths[n]); } free(cgio_paths); cgio_n_paths = 0; cgio_paths = NULL; return set_error(CGIO_ERR_NONE); } /*---------------------------------------------------------*/ int cgio_find_file (const char *parentfile, const char *filename, int file_type, int max_path_len, char *pathname) { int n, size, len, type; char *p, *s; if (filename == NULL || !*filename) return set_error(CGIO_ERR_NULL_FILE); size = max_path_len - 1 - (int)strlen(filename); if (size < 0) return set_error(CGIO_ERR_TOO_SMALL); /* full path */ if (*filename == '/' #ifdef _WIN32 || *filename == '\\' || *(filename+1) == ':' #endif ) { if (cgio_check_file(filename, &type) == CGIO_ERR_NONE && (file_type == CGIO_FILE_NONE || file_type == type)) { strcpy(pathname, filename); return set_error(CGIO_ERR_NONE); } if (get_error() == CGIO_ERR_TOO_MANY) return CGIO_ERR_TOO_MANY; return set_error(CGIO_ERR_NOT_FOUND); } /* check relative to parent's directory */ if (parentfile != NULL && *parentfile && (int)strlen(parentfile) < max_path_len-1) { strcpy(pathname, parentfile); p = strrchr(pathname, '/'); #ifdef _WIN32 if (p == NULL) p = strrchr(pathname, '\\'); #endif if (p != NULL) { *++p = 0; if ((int)strlen(pathname) <= size) { strcpy(p, filename); if (cgio_check_file(pathname, &type) == CGIO_ERR_NONE && (file_type == CGIO_FILE_NONE || file_type == type)) return set_error(CGIO_ERR_NONE); } } } /* check current directory */ if (cgio_check_file(filename, &type) == CGIO_ERR_NONE && (file_type == CGIO_FILE_NONE || file_type == type)) { strcpy(pathname, filename); return set_error(CGIO_ERR_NONE); } if (get_error() == CGIO_ERR_TOO_MANY) return CGIO_ERR_TOO_MANY; size -= 1; /* check file type environment variable */ if (file_type == CGIO_FILE_ADF || file_type == CGIO_FILE_ADF2) p = getenv ("ADF_LINK_PATH"); #if CG_BUILD_HDF5 else if (file_type == CGIO_FILE_HDF5) p = getenv ("HDF5_LINK_PATH"); #endif else p = NULL; while (p != NULL && *p) { #ifdef _WIN32 if (NULL == (s = strchr (p, ';'))) #else if (NULL == (s = strchr (p, ':'))) #endif len = (int)strlen(p); else len = (int)(s++ - p); if (len) { if (len > size) return set_error(CGIO_ERR_TOO_SMALL); strncpy (pathname, p, len); #ifdef _WIN32 for (n = 0; n < len; n++) { if (*p == '\\') *p = '/'; } #endif p = pathname + len; if (*(p-1) != '/') *p++ = '/'; strcpy (p, filename); if (cgio_check_file(pathname, &type) == CGIO_ERR_NONE && (file_type == CGIO_FILE_NONE || file_type == type)) return set_error(CGIO_ERR_NONE); } p = s; } /* check $CGNS_LINK_PATH environment variable */ p = getenv ("CGNS_LINK_PATH"); while (p != NULL && *p) { #ifdef _WIN32 if (NULL == (s = strchr (p, ';'))) #else if (NULL == (s = strchr (p, ':'))) #endif len = (int)strlen(p); else len = (int)(s++ - p); if (len) { if (len > size) return set_error(CGIO_ERR_TOO_SMALL); strncpy (pathname, p, len); #ifdef _WIN32 for (n = 0; n < len; n++) { if (*p == '\\') *p = '/'; } #endif p = pathname + len; if (*(p-1) != '/') *p++ = '/'; strcpy (p, filename); if (cgio_check_file(pathname, &type) == CGIO_ERR_NONE && (file_type == CGIO_FILE_NONE || file_type == type)) return set_error(CGIO_ERR_NONE); } p = s; } /* check list of search paths */ for (n = 0; n < cgio_n_paths; n++) { for (p = cgio_paths[n]; p != NULL && *p; ) { #ifdef _WIN32 if (NULL == (s = strchr (p, ';'))) #else if (NULL == (s = strchr (p, ':'))) #endif len = (int)strlen(p); else len = (int)(s++ - p); if (len) { if (len > size) return set_error(CGIO_ERR_TOO_SMALL); strncpy (pathname, p, len); #ifdef _WIN32 for (n = 0; n < len; n++) { if (*p == '\\') *p = '/'; } #endif p = pathname + len; if (*(p-1) != '/') *p++ = '/'; strcpy (p, filename); if (cgio_check_file(pathname, &type) == CGIO_ERR_NONE && (file_type == CGIO_FILE_NONE || file_type == type)) return set_error(CGIO_ERR_NONE); } p = s; } } return set_error(CGIO_ERR_NOT_FOUND); } /*========================================================= * utility routines independent of open files *=========================================================*/ int cgio_is_supported (int file_type) { if (file_type == CGIO_FILE_ADF) return set_error(CGIO_ERR_NONE); #if CG_SIZEOF_SIZE == 32 if (file_type == CGIO_FILE_ADF2) return set_error(CGIO_ERR_NONE); #endif #if CG_BUILD_HDF5 if (file_type == CGIO_FILE_HDF5) return set_error(CGIO_ERR_NONE); #endif last_err = CGIO_ERR_FILE_TYPE; return last_err; } /*---------------------------------------------------------*/ int cgio_configure (int what, void *value) { int ierr = CGIO_ERR_BAD_OPTION; if (what > 200) { #if CG_BUILD_HDF5 ADFH_Configure(what-200, value, &ierr); #endif } /* nothing here yet else if (what > 100) { } */ return set_error(ierr); } /*---------------------------------------------------------*/ void cgio_cleanup () { if (num_open) { int n; num_open++; for (n = 0; n < num_iolist; n++) { if (iolist[n].type != CGIO_FILE_NONE) cgio_close_file(n + 1); } free(iolist); num_iolist = 0; num_open = 0; } cgio_path_delete(NULL); } /*---------------------------------------------------------*/ int cgio_check_file (const char *filename, int *file_type) { int n; char buf[32]; FILE *fp; static char *HDF5sig = "\211HDF\r\n\032\n"; struct cgns_stat st; int mpibuf[2], err = CGIO_ERR_NONE; if (ACCESS (filename, 0) || cgns_stat (filename, &st) || S_IFREG != (st.st_mode & S_IFREG)) { last_err = CGIO_ERR_NOT_FOUND; return last_err; } *file_type = CGIO_FILE_NONE; #if CG_BUILD_PARALLEL /* don't overload the file system by having all the processors doing a read */ if(pcg_mpi_comm_rank == 0) { #endif fp = fopen(filename, "rb"); if (NULL == fp) { if (errno == EMFILE) { err = set_error(CGIO_ERR_TOO_MANY); } else { err = set_error(CGIO_ERR_FILE_OPEN); } return err; } if (sizeof(buf) != fread (buf, 1, sizeof(buf), fp)) { buf[4] = 0; } buf[sizeof(buf)-1] = 0; fclose (fp); /* check for ADF */ if (0 == strncmp (&buf[4], "ADF Database Version", 20)) { *file_type = CGIO_FILE_ADF; err = set_error(CGIO_ERR_NONE); } else { /* check for HDF5 */ for (n = 0; n < 8; n++) { if (buf[n] != HDF5sig[n]) break; } if (n == 8) { *file_type = CGIO_FILE_HDF5; err = set_error(CGIO_ERR_NONE); } } #if CG_BUILD_PARALLEL } if(pcg_mpi_initialized) { mpibuf[0] = err; mpibuf[1] = *file_type; MPI_Bcast(mpibuf, 2, MPI_INT, 0, pcg_mpi_comm); err = mpibuf[0]; *file_type = mpibuf[1]; } #endif if(err == set_error(CGIO_ERR_NONE)) return err; last_err = CGIO_ERR_FILE_TYPE; return last_err; } /*---------------------------------------------------------*/ int cgio_compute_data_size (const char *data_type, int ndims, const cgsize_t *dims, cglong_t *count) { if (ndims > 0) { int i; *count = (cglong_t)dims[0]; for (i = 1; i < ndims; i++) *count *= (cglong_t)dims[i]; } else { *count = 0; } switch (*data_type) { case 'B': case 'C': return CG_ERROR; case 'I': case 'U': if (data_type[1] == '4') return sizeof(int); if (data_type[1] == '8') return sizeof(cglong_t); break; case 'R': if (data_type[1] == '4') return sizeof(float); if (data_type[1] == '8') return sizeof(double); break; case 'X': if (data_type[1] == '4') return (2 * sizeof(float)); if (data_type[1] == '8') return (2 * sizeof(double)); break; } return CG_OK; } /*---------------------------------------------------------*/ int cgio_check_dimensions (int ndims, const cglong_t *dims) { int n; for (n = 0; n < ndims; n++) { if (dims[n] > CG_MAX_INT32) return set_error(CGIO_ERR_DIMENSIONS); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_copy_dimensions (int ndims, const cglong_t *dims64, cgsize_t *dims) { int n; #if CG_SIZEOF_SIZE == 32 if (cgio_check_dimensions(ndims, dims64)) return get_error(); #endif for (n = 0; n < ndims; n++) dims[n] = (cgsize_t)dims64[n]; return CGIO_ERR_NONE; } /*========================================================= * file operations *=========================================================*/ int cgio_open_file (const char *filename, int file_mode, int file_type, int *cgio_num) { int n, ierr; int type; char *fmode; double rootid; *cgio_num = 0; switch(file_mode) { case CGIO_MODE_READ: case 'r': case 'R': if (cgio_check_file(filename, &type)) return get_error(); #if CG_BUILD_PARALLEL if (file_type == CGIO_FILE_HDF5) { if (type != CGIO_FILE_HDF5) return set_error(CGIO_ERR_NOT_HDF5); } else #endif file_type = type; file_mode = CGIO_MODE_READ; fmode = "READ_ONLY"; break; case CGIO_MODE_WRITE: case 'w': case 'W': UNLINK(filename); type = file_type; file_mode = CGIO_MODE_WRITE; fmode = "NEW"; break; case CGIO_MODE_MODIFY: case 'm': case 'M': if (cgio_check_file(filename, &type)) return get_error(); #if CG_BUILD_PARALLEL if (file_type == CGIO_FILE_HDF5) { if (type != CGIO_FILE_HDF5) return set_error(CGIO_ERR_NOT_HDF5); } #endif file_type = type; file_mode = CGIO_MODE_MODIFY; fmode = "OLD"; break; default: return set_error(CGIO_ERR_FILE_MODE); } last_type = file_type; if (file_type == CGIO_FILE_NONE) { last_type = file_type = CGIO_FILE_ADF; ADF_Database_Open(filename, fmode, "NATIVE", &rootid, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_SIZEOF_SIZE == 32 else if (file_type == CGIO_FILE_ADF || file_type == CGIO_FILE_ADF2) { ADF_Database_Open(filename, fmode, "LEGACY", &rootid, &ierr); if (ierr > 0) return set_error(ierr); } #else else if (file_type == CGIO_FILE_ADF) { ADF_Database_Open(filename, fmode, "NATIVE", &rootid, &ierr); if (ierr > 0) return set_error(ierr); } #endif #if CG_BUILD_HDF5 else if (file_type == CGIO_FILE_HDF5) { ADFH_Database_Open(filename, fmode, hdf5_access, &rootid, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } if (num_iolist == 0) { num_iolist = 5; iolist = (cgns_io *) malloc (num_iolist * sizeof(cgns_io)); if (iolist == NULL) { fprintf(stderr, "malloc failed for IO list\n"); exit(1); } for (n = 0; n < num_iolist; n++) iolist[n].type = CGIO_FILE_NONE; } for (n = 0; n < num_iolist; n++) { if (iolist[n].type == CGIO_FILE_NONE) break; } if (n == num_iolist) { num_iolist++; iolist = (cgns_io *) realloc (iolist, num_iolist * sizeof(cgns_io)); if (iolist == NULL) { fprintf(stderr, "realloc failed for IO list\n"); exit(1); } } iolist[n].type = file_type; iolist[n].mode = file_mode; iolist[n].rootid = rootid; *cgio_num = n + 1; num_open++; return set_error(CGIO_ERR_NONE); } /*---------------------------------------------------------*/ int cgio_close_file (int cgio_num) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Database_Close(cgio->rootid, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Database_Close(cgio->rootid, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } cgio->type = CGIO_FILE_NONE; if (--num_open == 0) { free(iolist); num_iolist = 0; } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_compress_file (int cgio_num, const char *filename) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { if (rewrite_file (cgio_num, filename)) { ierr = get_error(); cgio_close_file(cgio_num); return set_error(ierr); } } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { if (rewrite_file (cgio_num, filename)) { ierr = get_error(); cgio_close_file(cgio_num); return set_error(ierr); } } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_copy_file (int cgio_num_inp, int cgio_num_out, int follow_links) { cgns_io *input, *output; if ((input = get_cgnsio(cgio_num_inp, 0)) == NULL || (output = get_cgnsio(cgio_num_out, 1)) == NULL) return get_error(); if (input->mode != CGIO_MODE_READ && cgio_flush_to_disk(cgio_num_inp)) return get_error(); if (recurse_nodes(cgio_num_inp, input->rootid, cgio_num_out, output->rootid, follow_links, 0)) return get_error(); return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_flush_to_disk (int cgio_num) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 1)) == NULL) return get_error(); if (cgio->mode == CGIO_MODE_READ) return CGIO_ERR_NONE; if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Flush_to_Disk(cgio->rootid, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Flush_to_Disk(cgio->rootid, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*========================================================= * file information *=========================================================*/ int cgio_library_version (int cgio_num, char *version) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Library_Version(version, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Library_Version(version, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_file_version (int cgio_num, char *file_version, char *creation_date, char *modified_date) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Database_Version(cgio->rootid, file_version, creation_date, modified_date, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Database_Version(cgio->rootid, file_version, creation_date, modified_date, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_get_root_id (int cgio_num, double *rootid) { cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); *rootid = cgio->rootid; return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_get_file_type (int cgio_num, int *file_type) { cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); *file_type = cgio->type; return CGIO_ERR_NONE; } /*========================================================= * error handling *=========================================================*/ void cgio_error_code (int *errcode, int *file_type) { *errcode = last_err; if (last_err <= 0) *file_type = CGIO_FILE_NONE; else *file_type = last_type; } /*---------------------------------------------------------*/ int cgio_error_message (char *error_msg) { char msg[ADF_MAX_ERROR_STR_LENGTH+1]; if (last_err <= 0) { int errcode = -last_err; if (errcode >= CGIO_MAX_ERRORS) strcpy(msg, "unknown cgio error message"); else strcpy(msg, cgio_ErrorMessage[errcode]); } else if (last_type == CGIO_FILE_ADF || last_type == CGIO_FILE_ADF2) { ADF_Error_Message(last_err, msg); } #if CG_BUILD_HDF5 else if (last_type == CGIO_FILE_HDF5) { ADFH_Error_Message(last_err, msg); } #endif else { strcpy(msg, "unknown error message"); } strcpy(error_msg, msg); return last_err; } /*---------------------------------------------------------*/ void cgio_error_exit (const char *msg) { fflush(stdout); if (msg != NULL && *msg) fprintf(stderr, "%s:", msg); if (last_err) { char errmsg[81]; cgio_error_message(errmsg); fprintf(stderr, "%s", errmsg); } putc('\n', stderr); cgio_cleanup(); exit(abort_on_error ? abort_on_error : -1); } /*---------------------------------------------------------*/ void cgio_error_abort (int abort_flag) { abort_on_error = abort_flag; } /*========================================================= * basic node operations *=========================================================*/ int cgio_create_node (int cgio_num, double pid, const char *name, double *id) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 1)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Create(pid, name, id, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Create(pid, name, id, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_new_node (int cgio_num, double pid, const char *name, const char *label, const char *data_type, int ndims, const cgsize_t *dims, const void *data, double *id) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 1)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Create(pid, name, id, &ierr); if (ierr > 0) return set_error(ierr); ADF_Set_Label(*id, label, &ierr); if (ierr > 0) return set_error(ierr); if (data_type != NULL && strcmp(data_type, "MT")) { ADF_Put_Dimension_Information(*id, data_type, ndims, dims, &ierr); if (ierr > 0) return set_error(ierr); if (data != NULL) { ADF_Write_All_Data(*id, (const char *)data, &ierr); if (ierr > 0) return set_error(ierr); } } } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Create(pid, name, id, &ierr); if (ierr > 0) return set_error(ierr); ADFH_Set_Label(*id, label, &ierr); if (ierr > 0) return set_error(ierr); if (data_type != NULL && strcmp(data_type, "MT")) { ADFH_Put_Dimension_Information(*id, data_type, ndims, dims, HDF5storage_type, &ierr); if (ierr > 0) return set_error(ierr); if (data != NULL) { ADFH_Write_All_Data(*id, NULL, (const char *)data, &ierr); if (ierr > 0) return set_error(ierr); } } } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_delete_node (int cgio_num, double pid, double id) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 1)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Delete(pid, id, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Delete(pid, id, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_move_node (int cgio_num, double pid, double id, double new_pid) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 1)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Move_Child(pid, id, new_pid, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Move_Child(pid, id, new_pid, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_copy_node (int cgio_num_inp, double id_inp, int cgio_num_out, double id_out) { cgns_io *input, *output; char label[CGIO_MAX_NAME_LENGTH+1]; char data_type[CGIO_MAX_NAME_LENGTH+1]; int ierr = 0, ndims; cgsize_t dims[CGIO_MAX_DIMENSIONS]; cglong_t data_size = 0; void *data = NULL; if ((input = get_cgnsio(cgio_num_inp, 0)) == NULL || (output = get_cgnsio(cgio_num_out, 1)) == NULL) return get_error(); /* read the input node data */ if (input->type == CGIO_FILE_ADF || input->type == CGIO_FILE_ADF2) { ADF_Get_Label(id_inp, label, &ierr); if (ierr > 0) return set_error(ierr); ADF_Get_Data_Type(id_inp, data_type, &ierr); if (ierr > 0) return set_error(ierr); ADF_Get_Number_of_Dimensions(id_inp, &ndims, &ierr); if (ierr > 0) return set_error(ierr); if (ndims > 0) { ADF_Get_Dimension_Values(id_inp, dims, &ierr); if (ierr > 0) return set_error(ierr); data_size = compute_data_size(data_type, ndims, dims); if (data_size) { data = malloc((size_t)data_size); if (data == NULL) return set_error(CGIO_ERR_MALLOC); ADF_Read_All_Data(id_inp, data_type, (char *)data, &ierr); if (ierr > 0) { free(data); return set_error(ierr); } } } } #if CG_BUILD_HDF5 else if (input->type == CGIO_FILE_HDF5) { ADFH_Get_Label(id_inp, label, &ierr); if (ierr > 0) return set_error(ierr); ADFH_Get_Data_Type(id_inp, data_type, &ierr); if (ierr > 0) return set_error(ierr); ADFH_Get_Number_of_Dimensions(id_inp, &ndims, &ierr); if (ierr > 0) return set_error(ierr); if (ndims > 0) { ADFH_Get_Dimension_Values(id_inp, dims, &ierr); if (ierr > 0) return set_error(ierr); data_size = compute_data_size(data_type, ndims, dims); if (data_size) { data = malloc((size_t)data_size); if (data == NULL) return set_error(CGIO_ERR_MALLOC); ADFH_Read_All_Data(id_inp, data_type, (char *)data, &ierr); if (ierr > 0) { free(data); return set_error(ierr); } } } } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } /* write data to output node */ if (output->type == CGIO_FILE_ADF || output->type == CGIO_FILE_ADF2) { ADF_Set_Label(id_out, label, &ierr); if (ierr <= 0) { ADF_Put_Dimension_Information(id_out, data_type, ndims, dims, &ierr); if (ierr <= 0 && data_size) ADF_Write_All_Data(id_out, (const char *)data, &ierr); } if (data_size) free(data); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (output->type == CGIO_FILE_HDF5) { ADFH_Set_Label(id_out, label, &ierr); if (ierr <= 0) { ADFH_Put_Dimension_Information(id_out, data_type, ndims, dims, HDF5storage_type, &ierr); if (ierr <= 0 && data_size) ADFH_Write_All_Data(id_out, NULL, (const char *)data, &ierr); } if (data_size) free(data); if (ierr > 0) return set_error(ierr); } #endif else { if (data_size) free(data); set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_release_id (int cgio_num, double id) { #if CG_BUILD_HDF5 cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_HDF5) { ADFH_Release_ID(id); } #endif return CGIO_ERR_NONE; } /*========================================================= * links *=========================================================*/ int cgio_is_link (int cgio_num, double id, int *link_len) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Is_Link(id, link_len, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Is_Link(id, link_len, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_link_size (int cgio_num, double id, int *file_len, int *name_len) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Link_Size(id, file_len, name_len, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Link_Size(id, file_len, name_len, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_create_link (int cgio_num, double pid, const char *name, const char *filename, const char *name_in_file, double *id) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 1)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Link(pid, name, filename, name_in_file, id, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Link(pid, name, filename, name_in_file, id, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_get_link (int cgio_num, double id, char *filename, char *name_in_file) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Get_Link_Path(id, filename, name_in_file, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Get_Link_Path(id, filename, name_in_file, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*========================================================= * node children *=========================================================*/ int cgio_number_children (int cgio_num, double id, int *num_children) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Number_of_Children(id, num_children, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Number_of_Children(id, num_children, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_children_ids (int cgio_num, double pid, int start, int max_ret, int *num_ret, double *ids) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Children_IDs(pid, start, max_ret, num_ret, ids, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Children_IDs(pid, start, max_ret, num_ret, ids, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_children_names (int cgio_num, double pid, int start, int max_ret, int name_len, int *num_ret, char *names) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Children_Names(pid, start, max_ret, name_len-1, num_ret, names, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Children_Names(pid, start, max_ret, name_len, num_ret, names, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*========================================================= * read nodes *=========================================================*/ int cgio_get_node_id (int cgio_num, double pid, const char *name, double *id) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Get_Node_ID(pid, name, id, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Get_Node_ID(pid, name, id, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_get_name (int cgio_num, double id, char *name) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Get_Name(id, name, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Get_Name(id, name, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_get_label (int cgio_num, double id, char *label) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Get_Label(id, label, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Get_Label(id, label, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_get_data_type (int cgio_num, double id, char *data_type) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Get_Data_Type(id, data_type, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Get_Data_Type(id, data_type, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_get_data_size (int cgio_num, double id, cglong_t *data_size) { int byte, ndims; cgsize_t dims[CGIO_MAX_DIMENSIONS]; char data_type[CGIO_MAX_NAME_LENGTH]; *data_size = 0; if (cgio_get_dimensions(cgio_num, id, &ndims, dims) || cgio_get_data_type(cgio_num, id, data_type)) return get_error(); byte = cgio_compute_data_size(data_type, ndims, dims, data_size); *data_size *= byte; return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_get_dimensions (int cgio_num, double id, int *num_dims, cgsize_t *dims) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Get_Number_of_Dimensions(id, num_dims, &ierr); if (NULL != dims && ierr <= 0 && *num_dims > 0) { ADF_Get_Dimension_Values(id, dims, &ierr); } if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Get_Number_of_Dimensions(id, num_dims, &ierr); if (NULL != dims && ierr <= 0 && *num_dims > 0) { ADFH_Get_Dimension_Values(id, dims, &ierr); } if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_read_all_data_type (int cgio_num, double id, const char *m_data_type, void *data) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { /* m_data_type is ignored since changing type when reading is not supported with adf files. In practice, we convert first and call cgio_read_all_data_type */ ADF_Read_All_Data(id, m_data_type, (char *)data, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Read_All_Data(id, m_data_type, data, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_read_block_data_type (int cgio_num, double id, cgsize_t b_start, cgsize_t b_end, const char *m_data_type, void *data) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Read_Block_Data(id, b_start, b_end, (char *)data, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Read_Block_Data(id, b_start, b_end, m_data_type, data, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_read_data_type (int cgio_num, double id, const cgsize_t *s_start, const cgsize_t *s_end, const cgsize_t *s_stride, const char *m_data_type, int m_num_dims, const cgsize_t *m_dims, const cgsize_t *m_start, const cgsize_t *m_end, const cgsize_t *m_stride, void *data) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Read_Data(id, s_start, s_end, s_stride, m_num_dims, m_dims, m_start, m_end, m_stride, m_data_type, (char *)data, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Read_Data(id, s_start, s_end, s_stride, m_num_dims, m_dims, m_start, m_end, m_stride, m_data_type, data, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*========================================================= * write nodes *=========================================================*/ int cgio_set_name (int cgio_num, double pid, double id, const char *name) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 1)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Put_Name(pid, id, name, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Put_Name(pid, id, name, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_set_label (int cgio_num, double id, const char *label) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 1)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Set_Label(id, label, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Set_Label(id, label, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_set_dimensions (int cgio_num, double id, const char *data_type, int num_dims, const cgsize_t *dims) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 1)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Put_Dimension_Information(id, data_type, num_dims, dims, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Put_Dimension_Information(id, data_type, num_dims, dims, HDF5storage_type, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_write_all_data (int cgio_num, double id, const void *data) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 1)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Write_All_Data(id, (const char *)data, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Write_All_Data(id, NULL, (const char *)data, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_write_all_data_type (int cgio_num, double id, const char *m_data_type, const void *data) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 1)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { /* Changing type when writing is not supported with adf files. In practice, we convert first and call cgio_write_all_data */ return set_error(CGIO_ERR_NOT_HDF5); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Write_All_Data(id, m_data_type, (const char *)data, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_write_block_data (int cgio_num, double id, cgsize_t b_start, cgsize_t b_end, void *data) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 0)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Write_Block_Data(id, b_start, b_end, (char *)data, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Write_Block_Data(id, b_start, b_end, (char *)data, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_write_data (int cgio_num, double id, const cgsize_t *s_start, const cgsize_t *s_end, const cgsize_t *s_stride, int m_num_dims, const cgsize_t *m_dims, const cgsize_t *m_start, const cgsize_t *m_end, const cgsize_t *m_stride, const void *data) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 1)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { ADF_Write_Data(id, s_start, s_end, s_stride, m_num_dims, m_dims, m_start, m_end, m_stride, (const char *)data, &ierr); if (ierr > 0) return set_error(ierr); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Write_Data(id, s_start, s_end, s_stride, NULL, m_num_dims, m_dims, m_start, m_end, m_stride, (const char *)data, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; } /*---------------------------------------------------------*/ int cgio_write_data_type (int cgio_num, double id, const cgsize_t *s_start, const cgsize_t *s_end, const cgsize_t *s_stride, const char *m_data_type, int m_num_dims, const cgsize_t *m_dims, const cgsize_t *m_start, const cgsize_t *m_end, const cgsize_t *m_stride, const void *data) { int ierr; cgns_io *cgio; if ((cgio = get_cgnsio(cgio_num, 1)) == NULL) return get_error(); if (cgio->type == CGIO_FILE_ADF || cgio->type == CGIO_FILE_ADF2) { /* Changing type when writing is not supported with adf files. In practice, we convert first and call cgio_write_data */ return set_error(CGIO_ERR_NOT_HDF5); } #if CG_BUILD_HDF5 else if (cgio->type == CGIO_FILE_HDF5) { ADFH_Write_Data(id, s_start, s_end, s_stride, m_data_type, m_num_dims, m_dims, m_start, m_end, m_stride, (const char *)data, &ierr); if (ierr > 0) return set_error(ierr); } #endif else { return set_error(CGIO_ERR_FILE_TYPE); } return CGIO_ERR_NONE; }