Checking whether CXX compiler has environ in stdlib.h failed to compile with the following output: Change Dir: '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/Utilities/KWSys/vtksys/CMakeFiles/CMakeTmp' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile cmTC_f6ba1/fast gmake[3]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/Utilities/KWSys/vtksys/CMakeFiles/CMakeTmp' /usr/bin/gmake -f CMakeFiles/cmTC_f6ba1.dir/build.make CMakeFiles/cmTC_f6ba1.dir/build gmake[4]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/Utilities/KWSys/vtksys/CMakeFiles/CMakeTmp' Building CXX object CMakeFiles/cmTC_f6ba1.dir/kwsysPlatformTestsCXX.cxx.o /usr/bin/c++ -DTEST_KWSYS_CXX_HAS_ENVIRON_IN_STDLIB_H -w -std=c++11 -fPIE -o CMakeFiles/cmTC_f6ba1.dir/kwsysPlatformTestsCXX.cxx.o -c /mnt/storage/workspace/med-ubuntu-weekly/ExtProjs/VTK/Utilities/KWSys/vtksys/kwsysPlatformTestsCXX.cxx /mnt/storage/workspace/med-ubuntu-weekly/ExtProjs/VTK/Utilities/KWSys/vtksys/kwsysPlatformTestsCXX.cxx: In function ‘int main()’: /mnt/storage/workspace/med-ubuntu-weekly/ExtProjs/VTK/Utilities/KWSys/vtksys/kwsysPlatformTestsCXX.cxx:53:13: error: ‘environ’ was not declared in this scope; did you mean ‘union’? 53 | char* e = environ[0]; | ^~~~~~~ | union gmake[4]: *** [CMakeFiles/cmTC_f6ba1.dir/build.make:81: CMakeFiles/cmTC_f6ba1.dir/kwsysPlatformTestsCXX.cxx.o] Error 1 gmake[4]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/Utilities/KWSys/vtksys/CMakeFiles/CMakeTmp' gmake[3]: *** [Makefile:133: cmTC_f6ba1/fast] Error 2 gmake[3]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/Utilities/KWSys/vtksys/CMakeFiles/CMakeTmp' Checking whether CXX compiler struct stat has st_mtimespec member failed to compile with the following output: Change Dir: '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/Utilities/KWSys/vtksys/CMakeFiles/CMakeTmp' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile cmTC_31645/fast gmake[3]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/Utilities/KWSys/vtksys/CMakeFiles/CMakeTmp' /usr/bin/gmake -f CMakeFiles/cmTC_31645.dir/build.make CMakeFiles/cmTC_31645.dir/build gmake[4]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/Utilities/KWSys/vtksys/CMakeFiles/CMakeTmp' Building CXX object CMakeFiles/cmTC_31645.dir/kwsysPlatformTestsCXX.cxx.o /usr/bin/c++ -DTEST_KWSYS_CXX_STAT_HAS_ST_MTIMESPEC -w -std=c++11 -fPIE -o CMakeFiles/cmTC_31645.dir/kwsysPlatformTestsCXX.cxx.o -c /mnt/storage/workspace/med-ubuntu-weekly/ExtProjs/VTK/Utilities/KWSys/vtksys/kwsysPlatformTestsCXX.cxx /mnt/storage/workspace/med-ubuntu-weekly/ExtProjs/VTK/Utilities/KWSys/vtksys/kwsysPlatformTestsCXX.cxx: In function ‘int main()’: /mnt/storage/workspace/med-ubuntu-weekly/ExtProjs/VTK/Utilities/KWSys/vtksys/kwsysPlatformTestsCXX.cxx:26:15: error: ‘struct stat’ has no member named ‘st_mtimespec’ 26 | (void)stat1.st_mtimespec.tv_sec; | ^~~~~~~~~~~~ /mnt/storage/workspace/med-ubuntu-weekly/ExtProjs/VTK/Utilities/KWSys/vtksys/kwsysPlatformTestsCXX.cxx:27:15: error: ‘struct stat’ has no member named ‘st_mtimespec’ 27 | (void)stat1.st_mtimespec.tv_nsec; | ^~~~~~~~~~~~ gmake[4]: *** [CMakeFiles/cmTC_31645.dir/build.make:81: CMakeFiles/cmTC_31645.dir/kwsysPlatformTestsCXX.cxx.o] Error 1 gmake[4]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/Utilities/KWSys/vtksys/CMakeFiles/CMakeTmp' gmake[3]: *** [Makefile:133: cmTC_31645/fast] Error 2 gmake[3]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/Utilities/KWSys/vtksys/CMakeFiles/CMakeTmp' Performing Other Test HAVE_TM_ZONE failed with the following output: Change Dir: '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile cmTC_351e4/fast gmake[3]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' /usr/bin/gmake -f CMakeFiles/cmTC_351e4.dir/build.make CMakeFiles/cmTC_351e4.dir/build gmake[4]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_351e4.dir/HDFTests.c.o /usr/bin/cc -w -fPIE -DHAVE_TM_ZONE -DHAVE_SYS_TIME_H -DHAVE_UNISTD_H -DHAVE_SYS_TYPES_H -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -o CMakeFiles/cmTC_351e4.dir/HDFTests.c.o -c /mnt/storage/workspace/med-ubuntu-weekly/ExtProjs/VTK/ThirdParty/hdf5/vtkhdf5/config/cmake_ext_mod/HDFTests.c Linking C executable cmTC_351e4 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_351e4.dir/link.txt --verbose=1 /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/Scrt1.o: in function `_start': (.text+0x1b): undefined reference to `main' collect2: error: ld returned 1 exit status /usr/bin/cc -w -Wl,-lc -Wl,-lc CMakeFiles/cmTC_351e4.dir/HDFTests.c.o -o cmTC_351e4 -lm gmake[4]: *** [CMakeFiles/cmTC_351e4.dir/build.make:102: cmTC_351e4] Error 1 gmake[4]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' gmake[3]: *** [Makefile:133: cmTC_351e4/fast] Error 2 gmake[3]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Performing Other Test HAVE_STRUCT_TM_TM_ZONE failed with the following output: Change Dir: '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile cmTC_7c6c3/fast gmake[3]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' /usr/bin/gmake -f CMakeFiles/cmTC_7c6c3.dir/build.make CMakeFiles/cmTC_7c6c3.dir/build gmake[4]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_7c6c3.dir/HDFTests.c.o /usr/bin/cc -w -fPIE -DHAVE_STRUCT_TM_TM_ZONE -DHAVE_SYS_TIME_H -DHAVE_UNISTD_H -DHAVE_SYS_TYPES_H -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -o CMakeFiles/cmTC_7c6c3.dir/HDFTests.c.o -c /mnt/storage/workspace/med-ubuntu-weekly/ExtProjs/VTK/ThirdParty/hdf5/vtkhdf5/config/cmake_ext_mod/HDFTests.c Linking C executable cmTC_7c6c3 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_7c6c3.dir/link.txt --verbose=1 /usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/11/../../../x86_64-linux-gnu/Scrt1.o: in function `_start': (.text+0x1b): undefined reference to `main' collect2: error: ld returned 1 exit status /usr/bin/cc -w -Wl,-lc -Wl,-lc CMakeFiles/cmTC_7c6c3.dir/HDFTests.c.o -o cmTC_7c6c3 -lm gmake[4]: *** [CMakeFiles/cmTC_7c6c3.dir/build.make:102: cmTC_7c6c3] Error 1 gmake[4]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' gmake[3]: *** [Makefile:133: cmTC_7c6c3/fast] Error 2 gmake[3]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Test H5_LDOUBLE_TO_LONG_SPECIAL Run failed with the following output and exit code: Change Dir: '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile cmTC_74351/fast gmake[3]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' /usr/bin/gmake -f CMakeFiles/cmTC_74351.dir/build.make CMakeFiles/cmTC_74351.dir/build gmake[4]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_74351.dir/ConversionTests.c.o /usr/bin/cc -w -DH5_LDOUBLE_TO_LONG_SPECIAL_TEST -fPIE -o CMakeFiles/cmTC_74351.dir/ConversionTests.c.o -c /mnt/storage/workspace/med-ubuntu-weekly/ExtProjs/VTK/ThirdParty/hdf5/vtkhdf5/config/cmake/ConversionTests.c Linking C executable cmTC_74351 /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_74351.dir/link.txt --verbose=1 /usr/bin/cc -w -DH5_LDOUBLE_TO_LONG_SPECIAL_TEST -Wl,-lc -Wl,-lc CMakeFiles/cmTC_74351.dir/ConversionTests.c.o -o cmTC_74351 gmake[4]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' gmake[3]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Test H5_LONG_TO_LDOUBLE_SPECIAL Run failed with the following output and exit code: Change Dir: '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile cmTC_bbffd/fast gmake[3]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' /usr/bin/gmake -f CMakeFiles/cmTC_bbffd.dir/build.make CMakeFiles/cmTC_bbffd.dir/build gmake[4]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_bbffd.dir/ConversionTests.c.o /usr/bin/cc -w -DH5_LONG_TO_LDOUBLE_SPECIAL_TEST -fPIE -o CMakeFiles/cmTC_bbffd.dir/ConversionTests.c.o -c /mnt/storage/workspace/med-ubuntu-weekly/ExtProjs/VTK/ThirdParty/hdf5/vtkhdf5/config/cmake/ConversionTests.c Linking C executable cmTC_bbffd /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_bbffd.dir/link.txt --verbose=1 /usr/bin/cc -w -DH5_LONG_TO_LDOUBLE_SPECIAL_TEST -Wl,-lc -Wl,-lc CMakeFiles/cmTC_bbffd.dir/ConversionTests.c.o -o cmTC_bbffd gmake[4]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' gmake[3]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Test H5_DISABLE_SOME_LDOUBLE_CONV Run failed with the following output and exit code: Change Dir: '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile cmTC_c921c/fast gmake[3]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' /usr/bin/gmake -f CMakeFiles/cmTC_c921c.dir/build.make CMakeFiles/cmTC_c921c.dir/build gmake[4]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_c921c.dir/ConversionTests.c.o /usr/bin/cc -w -DH5_DISABLE_SOME_LDOUBLE_CONV_TEST -fPIE -o CMakeFiles/cmTC_c921c.dir/ConversionTests.c.o -c /mnt/storage/workspace/med-ubuntu-weekly/ExtProjs/VTK/ThirdParty/hdf5/vtkhdf5/config/cmake/ConversionTests.c Linking C executable cmTC_c921c /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_c921c.dir/link.txt --verbose=1 /usr/bin/cc -w -DH5_DISABLE_SOME_LDOUBLE_CONV_TEST -Wl,-lc -Wl,-lc CMakeFiles/cmTC_c921c.dir/ConversionTests.c.o -o cmTC_c921c gmake[4]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' gmake[3]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Determining if the HDF5 Multi_Dataset exists failed with the following output: Change Dir: '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile cmTC_37a80/fast gmake[3]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' /usr/bin/gmake -f CMakeFiles/cmTC_37a80.dir/build.make CMakeFiles/cmTC_37a80.dir/build gmake[4]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_37a80.dir/test_HDF.c.o /usr/bin/cc -w -std=gnu99 -fPIE -o CMakeFiles/cmTC_37a80.dir/test_HDF.c.o -c /mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp/test_HDF.c /mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp/test_HDF.c:2:11: fatal error: hdf5.h: No such file or directory 2 | #include "hdf5.h" | ^~~~~~~~ compilation terminated. gmake[4]: *** [CMakeFiles/cmTC_37a80.dir/build.make:81: CMakeFiles/cmTC_37a80.dir/test_HDF.c.o] Error 1 gmake[4]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' gmake[3]: *** [Makefile:133: cmTC_37a80/fast] Error 2 gmake[3]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Determining if the HDF5 Collective_metadata exists failed with the following output: Change Dir: '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile cmTC_af165/fast gmake[3]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' /usr/bin/gmake -f CMakeFiles/cmTC_af165.dir/build.make CMakeFiles/cmTC_af165.dir/build gmake[4]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_af165.dir/test_HDF.c.o /usr/bin/cc -w -std=gnu99 -fPIE -o CMakeFiles/cmTC_af165.dir/test_HDF.c.o -c /mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp/test_HDF.c /mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp/test_HDF.c:2:11: fatal error: hdf5.h: No such file or directory 2 | #include "hdf5.h" | ^~~~~~~~ compilation terminated. gmake[4]: *** [CMakeFiles/cmTC_af165.dir/build.make:81: CMakeFiles/cmTC_af165.dir/test_HDF.c.o] Error 1 gmake[4]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' gmake[3]: *** [Makefile:133: cmTC_af165/fast] Error 2 gmake[3]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Determining if the HDF5 H5Pset_file_space_strategy exists failed with the following output: Change Dir: '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile cmTC_5719b/fast gmake[3]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' /usr/bin/gmake -f CMakeFiles/cmTC_5719b.dir/build.make CMakeFiles/cmTC_5719b.dir/build gmake[4]: Entering directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' Building C object CMakeFiles/cmTC_5719b.dir/test_HDF.c.o /usr/bin/cc -w -std=gnu99 -fPIE -o CMakeFiles/cmTC_5719b.dir/test_HDF.c.o -c /mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp/test_HDF.c /mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp/test_HDF.c:2:11: fatal error: hdf5.h: No such file or directory 2 | #include "hdf5.h" | ^~~~~~~~ compilation terminated. gmake[4]: *** [CMakeFiles/cmTC_5719b.dir/build.make:81: CMakeFiles/cmTC_5719b.dir/test_HDF.c.o] Error 1 gmake[4]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp' gmake[3]: *** [Makefile:133: cmTC_5719b/fast] Error 2 gmake[3]: Leaving directory '/mnt/storage/workspace/med-ubuntu-weekly/build/ExtProjs/VTK/CMakeFiles/CMakeTmp'