/*========================================================================= * * Copyright NumFOCUS * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. * You may obtain a copy of the License at * * https://www.apache.org/licenses/LICENSE-2.0.txt * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * See the License for the specific language governing permissions and * limitations under the License. * *=========================================================================*/ /*========================================================================= * * Portions of this file are subject to the VTK Toolkit Version 3 copyright. * * Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen * * For complete copyright, license and disclaimer of warranty information * please refer to the NOTICE file at the top of the ITK source tree. * *=========================================================================*/ #ifndef itkVTKImageIO_h #define itkVTKImageIO_h #include "ITKIOVTKExport.h" #include #include "itkStreamingImageIOBase.h" namespace itk { /** * \class VTKImageIO * * \brief ImageIO class for reading VTK images * * This implementation was taken from the Insight Journal: * https://www.insight-journal.org/browse/publication/729 * * \ingroup IOFilters * * \ingroup ITKIOVTK */ class ITKIOVTK_EXPORT VTKImageIO : public StreamingImageIOBase { public: ITK_DISALLOW_COPY_AND_MOVE(VTKImageIO); /** Standard class type aliases. */ using Self = VTKImageIO; using Superclass = StreamingImageIOBase; using Pointer = SmartPointer; using ConstPointer = SmartPointer; /** Method for creation through the object factory. */ itkNewMacro(Self); /** \see LightObject::GetNameOfClass() */ itkOverrideGetNameOfClassMacro(VTKImageIO); // see super class for documentation // // overridden to return true only when supported bool CanStreamWrite() override; // see super class for documentation // // overridden to return true only when supported bool CanStreamRead() override; /*-------- This part of the interface deals with reading data. ------ */ /** Determine the file type. Returns true if this ImageIO can read the * file specified. */ bool CanReadFile(const char *) override; /** Set the spacing and dimension information for the current filename. */ void ReadImageInformation() override; /** Reads the data from disk into the memory buffer provided. */ void Read(void * buffer) override; /*-------- This part of the interfaces deals with writing data. ----- */ /** Determine the file type. Returns true if this ImageIO can read the * file specified. */ bool CanWriteFile(const char *) override; /** Writes the spacing and dimensions of the image. * Assumes SetFileName has been called with a valid file name. */ void WriteImageInformation() override {} /** Writes the data to disk from the memory buffer provided. Make sure * that the IORegion has been set properly. */ void Write(const void * buffer) override; /** returns the header size, if it is unknown it will return 0 */ SizeType GetHeaderSize() const override { return this->m_HeaderSize; } protected: VTKImageIO(); ~VTKImageIO() override; void PrintSelf(std::ostream & os, Indent indent) const override; void InternalReadImageInformation(std::ifstream & file); // Internal function to get next line from a given file (*.vtk) int GetNextLine(std::ifstream & ifs, std::string & line, bool lowerCase = true, SizeValueType count = 0); void WriteImageInformation(const void * buffer); void ReadHeaderSize(std::ifstream & file); /** Convenient method to read a buffer as ASCII text. */ void ReadBufferAsASCII(std::istream & is, void * buffer, IOComponentEnum ctype, SizeType numComp) override; /** Convenient method to write a buffer as ASCII text. */ void WriteBufferAsASCII(std::ostream & os, const void * buffer, IOComponentEnum ctype, SizeType numComp) override; /** We have a special method to read symmetric second rank tensors because * the VTK file format expands the symmetry and only supports 3D tensors. */ virtual void ReadSymmetricTensorBufferAsBinary(std::istream & is, void * buffer, StreamingImageIOBase::SizeType num); /** We have a special method to write symmetric second rank tensors because * the VTK file format expands the symmetry and only supports 3D tensors. */ virtual void WriteSymmetricTensorBufferAsBinary(std::ostream & os, const void * buffer, StreamingImageIOBase::SizeType num); private: void SetPixelTypeFromString(const std::string & pixelType); std::string GetComponentTypeAsString(IOComponentEnum); /** Return the number of pixels in the IOregion. */ SizeType GetIORegionSizeInPixels() const; /** Return the number of bytes in the IOregion. */ SizeType GetIORegionSizeInBytes() const; /** Return the number of pixels times the number * of components in the IOregion. */ SizeType GetIORegionSizeInComponents() const; SizeType m_HeaderSize{}; }; } // end namespace itk #endif // itkVTKImageIO_h