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|  | SOFA_CLASS (QuadSetTopologyModifier, EdgeSetTopologyModifier) | 
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| void | init () override | 
|  | Initialization method called at graph creation and modification, during top-down traversal.  More... 
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|  | 
| virtual void | addQuads (const sofa::type::vector< Quad > &quads) | 
|  | add a set of quads  More... 
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| virtual void | addQuads (const sofa::type::vector< Quad > &quads, const sofa::type::vector< sofa::type::vector< QuadID > > &ancestors, const sofa::type::vector< sofa::type::vector< SReal > > &baryCoefs) | 
|  | add a set of quads  More... 
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|  | 
| void | addQuadProcess (Quad e) | 
|  | Effectively Add a quad.  More... 
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| virtual void | removeQuads (const sofa::type::vector< QuadID > &quadIds, const bool removeIsolatedEdges, const bool removeIsolatedPoints) | 
|  | Remove a set of quads.  More... 
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| void | removeItems (const sofa::type::vector< QuadID > &items) override | 
|  | Generic method to remove a list of items.  More... 
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|  | 
|  | SOFA_CLASS (EdgeSetTopologyModifier, PointSetTopologyModifier) | 
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| virtual void | addEdges (const sofa::type::vector< Edge > &edges) | 
|  | add a set of edges  More... 
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| virtual void | addEdges (const sofa::type::vector< Edge > &edges, const sofa::type::vector< sofa::type::vector< EdgeID > > &ancestors, const sofa::type::vector< sofa::type::vector< SReal > > &baryCoefs) | 
|  | add a set of edges  More... 
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|  | 
| virtual void | addEdges (const sofa::type::vector< Edge > &edges, const sofa::type::vector< core::topology::EdgeAncestorElem > &ancestorElems) | 
|  | add a set of edges  More... 
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| void | addEdgeProcess (Edge e) | 
|  | Effectively add an edge.  More... 
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| virtual void | swapEdgesProcess (const sofa::type::vector< sofa::type::vector< EdgeID > > &edgesPairs) | 
|  | Swap the edges.  More... 
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| virtual void | fuseEdgesProcess (const sofa::type::vector< sofa::type::vector< EdgeID > > &edgesPairs, const bool removeIsolatedPoints=true) | 
|  | Fuse the edges.  More... 
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| virtual void | splitEdgesProcess (sofa::type::vector< EdgeID > &indices, const bool removeIsolatedPoints=true) | 
|  | Split the edges.  More... 
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|  | 
| virtual void | splitEdgesProcess (sofa::type::vector< EdgeID > &indices, const sofa::type::vector< sofa::type::vector< SReal > > &baryCoefs, const bool removeIsolatedPoints=true) | 
|  | Split the edges.  More... 
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|  | 
| virtual void | removeEdges (const sofa::type::vector< EdgeID > &edgeIds, const bool removeIsolatedPoints=true) | 
|  | Remove a set of edges.  More... 
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| virtual void | swapEdges (const sofa::type::vector< sofa::type::vector< EdgeID > > &edgesPairs) | 
|  | Swap a list of pair edges, replacing each edge pair ((p11, p12), (p21, p22)) by the edge pair ((p11, p21), (p12, p22))  More... 
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| virtual void | fuseEdges (const sofa::type::vector< sofa::type::vector< EdgeID > > &edgesPairs, const bool removeIsolatedPoints=true) | 
|  | Fuse a list of pair edges, replacing each edge pair ((p11, p12), (p21, p22)) by one edge (p11, p22)  More... 
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| virtual void | splitEdges (sofa::type::vector< EdgeID > &indices, const bool removeIsolatedPoints=true) | 
|  | Split an array of edges, replacing each edge (p1, p2) by two edges (p1, p3) and (p3, p2) where p3 is the new vertex On each edge, a vertex is created based on its barycentric coordinates.  More... 
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| virtual void | splitEdges (sofa::type::vector< EdgeID > &indices, const sofa::type::vector< sofa::type::vector< SReal > > &baryCoefs, const bool removeIsolatedPoints=true) | 
|  | Split an array of edges, replacing each edge (p1, p2) by two edges (p1, p3) and (p3, p2) where p3 is the new vertex On each edge, a vertex is created based on its barycentric coordinates.  More... 
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| virtual void | resortCuthillMckee (sofa::type::vector< int > &inverse_permutation) | 
|  | Gives the optimal vertex permutation according to the Reverse CuthillMckee algorithm (use BOOST GRAPH LIBRARY)  More... 
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| virtual bool | removeConnectedComponents (EdgeID elemID) | 
|  | Given an element indice, it will remove all the connected component in which this element belongs to. Warning: if there is only one connected component in the model. All the object will be removed.  More... 
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| virtual bool | removeConnectedElements (EdgeID elemID) | 
|  | Given an element indice, it will remove all elements directly connected to the input one.  More... 
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| virtual bool | removeIsolatedElements () | 
|  | If several connected components are detected, it will keep only the biggest one and remove all the rest. Warning: if two connected components have the same number of element and are the biggest. It will keep the first one.  More... 
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| virtual bool | removeIsolatedElements (sofa::Size scaleElem) | 
|  | If several connected components are detected, it will remove all connected component with less than a given number of elements.  More... 
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|  | 
|  | SOFA_CLASS (PointSetTopologyModifier, core::topology::TopologyModifier) | 
|  | 
| virtual void | swapPoints (const Index i1, const Index i2) | 
|  | Swap points i1 and i2.  More... 
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| virtual void | renumberPoints (const sofa::type::vector< PointID > &index, const sofa::type::vector< PointID > &inv_index, const bool renumberDOF=true) | 
|  | Generic method for points renumbering.  More... 
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|  | 
| virtual void | addPoints (const sofa::Size nPoints, const bool addDOF=true) | 
|  | Add a set of points.  More... 
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|  | 
| virtual void | addPoints (const sofa::Size nPoints, const sofa::type::vector< sofa::type::vector< PointID > > &ancestors, const sofa::type::vector< sofa::type::vector< SReal > > &coefs, const bool addDOF=true) | 
|  | Add a set of points.  More... 
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| virtual void | addPoints (const sofa::Size nPoints, const sofa::type::vector< core::topology::PointAncestorElem > &ancestorElems, const bool addDOF=true) | 
|  | Add a set of points according to their ancestors topology elements.  More... 
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| virtual void | removePoints (sofa::type::vector< PointID > &indices, const bool removeDOF=true) | 
|  | Generic method to remove a list of point.  More... 
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|  | 
| void | propagateStateChanges () override | 
|  | Called by a topology to warn the Mechanical Object component that points have been added or will be removed.  More... 
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| void | notifyEndingEvent () override | 
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|  | SOFA_CLASS (TopologyModifier, BaseTopologyObject) | 
|  | 
| void | init () override | 
|  | Initialization method called at graph creation and modification, during top-down traversal.  More... 
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|  | SOFA_CLASS (BaseTopologyObject, core::objectmodel::BaseObject) | 
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| bool | insertInNode (objectmodel::BaseNode *node) override | 
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| bool | removeInNode (objectmodel::BaseNode *node) override | 
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|  | SOFA_CLASS (BaseObject, Base) | 
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| virtual void | draw (const core::visual::VisualParams *) | 
|  | Render internal data of this object, for debugging purposes.  More... 
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| virtual void | computeBBox (const core::ExecParams *, bool=false) | 
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| void | setSrc (const std::string &v, std::vector< std::string > *attributeList=nullptr) | 
|  | Sets a source Object and parses it to collect dependent Data.  More... 
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| void | setSrc (const std::string &v, const BaseObject *loader, std::vector< std::string > *attributeList=nullptr) | 
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| Base * | findLinkDestClass (const BaseClass *destType, const std::string &path, const BaseLink *link) override | 
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| virtual std::string | getPathName () const override | 
|  | Return the full path name of this object.  More... 
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| SReal | getTime () const | 
|  | Current time.  More... 
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| const BaseContext * | getContext () const | 
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| BaseContext * | getContext () | 
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| const BaseObject * | getMaster () const | 
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| BaseObject * | getMaster () | 
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| const VecSlaves & | getSlaves () const | 
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| BaseObject * | getSlave (const std::string &name) const | 
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| virtual void | addSlave (BaseObject::SPtr s) | 
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| virtual void | removeSlave (BaseObject::SPtr s) | 
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| virtual void | handleEvent (Event *) | 
|  | Handle an event.  More... 
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| virtual void | handleTopologyChange () | 
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| virtual void | handleTopologyChange (core::topology::Topology *t) | 
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| void | parse (BaseObjectDescription *arg) override | 
|  | Parse the given description to assign values to this object's fields and potentially other parameters.  More... 
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|  | 
| virtual void | bwdInit () | 
|  | Initialization method called at graph creation and modification, during bottom-up traversal.  More... 
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|  | 
| virtual void | reinit () | 
|  | Update method called when variables used in precomputation are modified.  More... 
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|  | 
| void | updateInternal () | 
|  | Update method called when variables (used to compute other internal variables) are modified.  More... 
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|  | 
| virtual void | storeResetState () | 
|  | Save the initial state for later uses in reset()  More... 
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|  | 
| virtual void | reset () | 
|  | Reset to initial state.  More... 
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|  | 
| virtual void | cleanup () | 
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| virtual const BaseClass * | getClass () const | 
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| void | addDeprecatedAttribute (lifecycle::DeprecatedData *attribute) | 
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| void | addUpdateCallback (const std::string &name, std::initializer_list< BaseData * > inputs, std::function< sofa::core::objectmodel::ComponentState(const DataTracker &)> function, std::initializer_list< BaseData * > outputs) | 
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| void | addOutputsToCallback (const std::string &name, std::initializer_list< BaseData * > outputs) | 
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| const std::string & | getName () const | 
|  | Accessor to the object name.  More... 
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| void | setName (const std::string &n) | 
|  | Set the name of this object.  More... 
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| void | setName (const std::string &n, int counter) | 
|  | Set the name of this object, adding an integer counter.  More... 
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| std::string | getTypeName () const | 
|  | Get the type name of this object (i.e. class and template types)  More... 
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|  | 
| virtual std::string | getClassName () const | 
|  | Get the class name of this object.  More... 
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|  | 
| virtual std::string | getTemplateName () const final | 
|  | Get the template type names (if any) used to instantiate this object.  More... 
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|  | 
| std::string | getNameSpaceName () const | 
|  | Get the template type names (if any) used to instantiate this object.  More... 
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|  | 
| void | setDefinitionSourceFileName (const std::string &sourceFileName) | 
|  | Set the source filename (where the component is implemented)  More... 
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|  | 
| const std::string & | getDefinitionSourceFileName () const | 
|  | Get the source filename (where the component is implemented)  More... 
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|  | 
| void | setDefinitionSourceFilePos (const int) | 
|  | Set the source location (where the component is implemented)  More... 
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|  | 
| int | getDefinitionSourceFilePos () const | 
|  | Get the source location (where the component is implemented)  More... 
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|  | 
| void | setInstanciationSourceFileName (const std::string &sourceFileName) | 
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| const std::string & | getInstanciationSourceFileName () const | 
|  | 
| void | setInstanciationSourceFilePos (const int) | 
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| int | getInstanciationSourceFilePos () const | 
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| void | addMessage (const sofa::helper::logging::Message &m) const | 
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| size_t | countLoggedMessages (sofa::helper::logging::Message::TypeSet t=sofa::helper::logging::Message::AnyTypes) const | 
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| const std::deque< sofa::helper::logging::Message > & | getLoggedMessages () const | 
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| const std::string | getLoggedMessagesAsString (sofa::helper::logging::Message::TypeSet t=sofa::helper::logging::Message::AnyTypes) const | 
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| void | clearLoggedMessages () const | 
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| bool | notMuted () const | 
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| const sofa::core::objectmodel::TagSet & | getTags () const | 
|  | Represents the subsets the object belongs to.  More... 
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|  | 
| bool | hasTag (Tag t) const | 
|  | Return true if the object belong to the given subset.  More... 
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|  | 
| void | addTag (Tag t) | 
|  | Add a subset qualification to the object.  More... 
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| void | removeTag (Tag t) | 
|  | Remove a subset qualification to the object.  More... 
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|  | 
| ComponentState | getComponentState () const | 
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| bool | isComponentStateValid () const | 
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| bool | isComponentStateInvalid () const | 
|  | 
|  | SOFA_ATTRIBUTE_DEPRECATED__TOBASECONSTRAINT () virtual const behavior | 
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| virtual bool | parseField (const std::string &attribute, const std::string &value) | 
|  | Assign one field value (Data or Link)  More... 
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|  | 
| virtual bool | hasField (const std::string &attribute) const | 
|  | Check if a given Data field or Link exists.  More... 
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|  | 
| void | parseFields (const std::list< std::string > &str) | 
|  | Assign the field values stored in the given list of name + value pairs of strings.  More... 
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|  | 
| virtual void | parseFields (const std::map< std::string, std::string * > &str) | 
|  | Assign the field values stored in the given map of name -> value pairs.  More... 
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|  | 
| void | writeDatas (std::map< std::string, std::string * > &str)=delete | 
|  | Write the current field values to the given map of name -> value pairs.  More... 
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|  | 
| void | writeDatas (std::ostream &out, const std::string &separator=" ") | 
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| BaseData * | findData (const std::string &name) const | 
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| std::vector< BaseData * > | findGlobalField (const std::string &name) const | 
|  | Find data fields given a name: several can be found as we look into the alias map.  More... 
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|  | 
| BaseLink * | findLink (const std::string &name) const | 
|  | 
| std::vector< BaseLink * > | findLinks (const std::string &name) const | 
|  | Find link fields given a name: several can be found as we look into the alias map.  More... 
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|  | 
| virtual void | updateLinks (bool logErrors=true) | 
|  | Update pointers in case the pointed-to objects have appeared.  More... 
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|  | 
| template<class T > | 
| BaseData::BaseInitData | initData (::sofa::core::objectmodel::Data< T > *field, const char *name, const char *help, ::sofa::core::objectmodel::BaseData::DataFlags dataflags) | 
|  | Helper method used to initialize a data field containing a value of type T.  More... 
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|  | 
| template<class T > | 
| BaseData::BaseInitData | initData (Data< T > *field, const char *name, const char *help, bool isDisplayed=true, bool isReadOnly=false) | 
|  | Helper method used to initialize a data field containing a value of type T.  More... 
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|  | 
| template<class T > | 
| Data< T >::InitData | initData (Data< T > *field, const T &value, const char *name, const char *help, bool isDisplayed=true, bool isReadOnly=false) | 
|  | Helper method used to initialize a data field containing a value of type T.  More... 
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|  | 
| void | addData (BaseData *f, const std::string &name) | 
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| void | addData (BaseData *f) | 
|  | 
| void | removeData (BaseData *f) | 
|  | Remove a data field.  More... 
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|  | 
| void | addAlias (BaseData *field, const char *alias) | 
|  | Add an alias to a Data.  More... 
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|  | 
| void | addLink (BaseLink *l) | 
|  | Add a link.  More... 
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|  | 
| void | addAlias (BaseLink *link, const char *alias) | 
|  | Add an alias to a Link.  More... 
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|  | 
| const VecData & | getDataFields () const | 
|  | Accessor to the vector containing all the fields of this object.  More... 
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|  | 
| const MapData & | getDataAliases () const | 
|  | Accessor to the map containing all the aliases of this object.  More... 
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|  | 
| const VecLink & | getLinks () const | 
|  | Accessor to the vector containing all the fields of this object.  More... 
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|  | 
| const MapLink & | getLinkAliases () const | 
|  | Accessor to the map containing all the aliases of this object.  More... 
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|  | 
| virtual bool | findDataLinkDest (BaseData *&ptr, const std::string &path, const BaseLink *link) | 
|  | 
| template<class T > | 
| bool | findLinkDest (T *&ptr, const std::string &path, const BaseLink *link) | 
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|  | 
|  | QuadSetTopologyModifier () | 
|  | 
|  | ~QuadSetTopologyModifier () override | 
|  | 
| void | addQuadsWarning (const size_t nQuads, const sofa::type::vector< Quad > &quadsList, const sofa::type::vector< QuadID > &quadsIndexList) | 
|  | Sends a message to warn that some quads were added in this topology.  More... 
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|  | 
| void | addQuadsWarning (const size_t nQuads, const sofa::type::vector< Quad > &quadsList, const sofa::type::vector< QuadID > &quadsIndexList, const sofa::type::vector< sofa::type::vector< QuadID > > &ancestors, const sofa::type::vector< sofa::type::vector< SReal > > &baryCoefs) | 
|  | Sends a message to warn that some quads were added in this topology.  More... 
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|  | 
| virtual void | addQuadsProcess (const sofa::type::vector< Quad > &quads) | 
|  | Effectively Add some quads to this topology.  More... 
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|  | 
| virtual void | removeQuadsWarning (sofa::type::vector< QuadID > &quads) | 
|  | Sends a message to warn that some quads are about to be deleted.  More... 
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|  | 
| virtual void | removeQuadsProcess (const sofa::type::vector< QuadID > &indices, const bool removeIsolatedEdges=false, const bool removeIsolatedPoints=false) | 
|  | Remove a subset of quads. Eventually remove isolated edges and vertices.  More... 
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|  | 
| void | addEdgesProcess (const sofa::type::vector< Edge > &edges) override | 
|  | Add some edges to this topology.  More... 
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|  | 
| void | removeEdgesProcess (const sofa::type::vector< QuadID > &indices, const bool removeIsolatedItems=false) override | 
|  | Remove a subset of edges.  More... 
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|  | 
| void | addPointsProcess (const sofa::Size nPoints) override | 
|  | Add some points to this topology.  More... 
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|  | 
| void | removePointsProcess (const sofa::type::vector< PointID > &indices, const bool removeDOF=true) override | 
|  | Remove a subset of points.  More... 
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|  | 
| void | renumberPointsProcess (const sofa::type::vector< PointID > &index, const sofa::type::vector< PointID > &inv_index, const bool renumberDOF=true) override | 
|  | Reorder this topology.  More... 
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|  | 
| void | propagateTopologicalEngineChanges () override | 
|  | function to propagate topological change events by parsing the list of TopologyHandlers linked to this topology.  More... 
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|  | 
|  | EdgeSetTopologyModifier () | 
|  | 
|  | ~EdgeSetTopologyModifier () override | 
|  | 
| virtual void | addEdgesWarning (const sofa::Size nEdges) | 
|  | Sends a message to warn that some edges were added in this topology.  More... 
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|  | 
| virtual void | addEdgesWarning (const sofa::Size nEdges, const sofa::type::vector< Edge > &edgesList, const sofa::type::vector< EdgeID > &edgesIndexList) | 
|  | Sends a message to warn that some edges were added in this topology.  More... 
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|  | 
| virtual void | addEdgesWarning (const sofa::Size nEdges, const sofa::type::vector< Edge > &edgesList, const sofa::type::vector< EdgeID > &edgesIndexList, const sofa::type::vector< sofa::type::vector< EdgeID > > &ancestors) | 
|  | Sends a message to warn that some edges were added in this topology.  More... 
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|  | 
| virtual void | addEdgesWarning (const sofa::Size nEdges, const sofa::type::vector< Edge > &edgesList, const sofa::type::vector< EdgeID > &edgesIndexList, const sofa::type::vector< sofa::type::vector< EdgeID > > &ancestors, const sofa::type::vector< sofa::type::vector< SReal > > &baryCoefs) | 
|  | Sends a message to warn that some edges were added in this topology.  More... 
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|  | 
| virtual void | addEdgesWarning (const sofa::Size nEdges, const sofa::type::vector< Edge > &edgesList, const sofa::type::vector< EdgeID > &edgesIndexList, const sofa::type::vector< core::topology::EdgeAncestorElem > &ancestorElems) | 
|  | Sends a message to warn that some edges were added in this topology.  More... 
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|  | 
| virtual void | removeEdgesWarning (sofa::type::vector< EdgeID > &edges) | 
|  | Sends a message to warn that some edges are about to be deleted.  More... 
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|  | 
| void | movePointsProcess (const sofa::type::vector< PointID > &id, const sofa::type::vector< sofa::type::vector< PointID > > &ancestors, const sofa::type::vector< sofa::type::vector< SReal > > &coefs, const bool moveDOF=true) override | 
|  | Move input points indices to input new coords. Also propagate event and update edgesAroundVertex for data handling.  More... 
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|  | 
|  | PointSetTopologyModifier () | 
|  | 
|  | ~PointSetTopologyModifier () override | 
|  | 
| void | addPointsWarning (const sofa::Size nPoints, const bool addDOF=true) | 
|  | Sends a message to warn that some points were added in this topology.  More... 
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|  | 
| void | addPointsWarning (const sofa::Size nPoints, const sofa::type::vector< sofa::type::vector< PointID > > &ancestors, const sofa::type::vector< sofa::type::vector< SReal > > &coefs, const bool addDOF=true) | 
|  | Sends a message to warn that some points were added in this topology.  More... 
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|  | 
| void | addPointsWarning (const sofa::Size nPoints, const sofa::type::vector< core::topology::PointAncestorElem > &ancestorElems, const bool addDOF=true) | 
|  | Sends a message to warn that some points were added in this topology.  More... 
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|  | 
| void | removePointsWarning (sofa::type::vector< PointID > &indices, const bool removeDOF=true) | 
|  | Sends a message to warn that some points are about to be deleted.  More... 
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|  | 
| void | renumberPointsWarning (const sofa::type::vector< PointID > &index, const sofa::type::vector< PointID > &inv_index, const bool renumberDOF=true) | 
|  | Sends a message to warn that points are about to be reordered.  More... 
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|  | 
| void | propagateTopologicalChanges () override | 
|  | Called by a topology to warn specific topologies linked to it that TopologyChange objects happened.  More... 
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|  | 
|  | TopologyModifier () | 
|  | Constructor.  More... 
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|  | 
|  | ~TopologyModifier () override | 
|  | Destructor.  More... 
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|  | 
| void | addTopologyChange (const TopologyChange *topologyChange) | 
|  | Adds a TopologyChange object to the list of the topology this object describes.  More... 
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|  | 
| void | addStateChange (const TopologyChange *topologyChange) | 
|  | Adds a StateChange object to the list of the topology this object describes.  More... 
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|  | 
|  | BaseTopologyObject () | 
|  | 
|  | ~BaseTopologyObject () override | 
|  | 
|  | BaseObject () | 
|  | 
|  | ~BaseObject () override | 
|  | 
| virtual void | doUpdateInternal () | 
|  | Implementation of the internal update.  More... 
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|  | 
| void | changeContextLink (BaseContext *before, BaseContext *&after) | 
|  | 
| void | changeSlavesLink (BaseObject::SPtr ptr, std::size_t, bool add) | 
|  | This method insures that slaves objects have master and context links set correctly.  More... 
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|  | 
| void | trackInternalData (const BaseData &data) | 
|  | Method called to add the Data to the DataTracker (listing the Data to track)  More... 
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|  | 
| void | cleanTracker () | 
|  | 
| bool | hasDataChanged (const BaseData &data) | 
|  | Method called to know if a tracked Data has changed.  More... 
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|  | 
|  | Base () | 
|  | 
| virtual | ~Base () | 
|  | 
| void | initData0 (BaseData *field, BaseData::BaseInitData &res, const char *name, const char *help, bool isDisplayed=true, bool isReadOnly=false) | 
|  | Helper method used by initData()  More... 
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|  | 
| void | initData0 (BaseData *field, BaseData::BaseInitData &res, const char *name, const char *help, BaseData::DataFlags dataFlags) | 
|  | Helper method used by initData()  More... 
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|  | 
| template<class T > | 
| void | initData0 (Data< T > *field, typename Data< T >::InitData &res, const T &value, const char *name, const char *help, bool isDisplayed=true, bool isReadOnly=false) | 
|  | Helper method used by initData()  More... 
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|  | 
| virtual | ~IntrusiveObject ()=default | 
|  |