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Started by timer
Running as SYSTEM
[EnvInject] - Loading node environment variables.
Building remotely on sos-builder01 (lin) in workspace /builds/workspace/npefix
[WS-CLEANUP] Deleting project workspace...
[WS-CLEANUP] Deferred wipeout is used...
[WS-CLEANUP] Done
No credentials specified
Cloning the remote Git repository
Cloning repository https://github.com/Spirals-Team/npefix.git
 > git init /builds/workspace/npefix # timeout=10
Fetching upstream changes from https://github.com/Spirals-Team/npefix.git
 > git --version # timeout=10
 > git fetch --tags --progress https://github.com/Spirals-Team/npefix.git +refs/heads/*:refs/remotes/origin/*
 > git config remote.origin.url https://github.com/Spirals-Team/npefix.git # timeout=10
 > git config --add remote.origin.fetch +refs/heads/*:refs/remotes/origin/* # timeout=10
 > git config remote.origin.url https://github.com/Spirals-Team/npefix.git # timeout=10
Fetching upstream changes from https://github.com/Spirals-Team/npefix.git
 > git fetch --tags --progress https://github.com/Spirals-Team/npefix.git +refs/heads/*:refs/remotes/origin/*
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git rev-parse refs/remotes/origin/origin/master^{commit} # timeout=10
Checking out Revision 80cfc38d4c3d5244c1a74c86e285193bb2670ea6 (refs/remotes/origin/master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 80cfc38d4c3d5244c1a74c86e285193bb2670ea6
Commit message: "Update README.md"
 > git rev-list --no-walk 80cfc38d4c3d5244c1a74c86e285193bb2670ea6 # timeout=10
[npefix] $ /bin/sh -xe /tmp/jenkins1551310691131612739.sh
+ rm -rf /builds/.m2/repository/fr/inria/gforge/spoon
[npefix] $ /bin/sh -xe /tmp/jenkins8787555863674992744.sh
+ mvn versions:use-latest-versions -DallowSnapshots=true
Picked up JAVA_TOOL_OPTIONS: -Dfile.encoding=UTF8
[INFO] Scanning for projects...
[INFO] Inspecting build with total of 1 modules...
[INFO] Installing Nexus Staging features:
[INFO]   ... total of 1 executions of maven-deploy-plugin replaced with nexus-staging-maven-plugin
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building npefix 0.8-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO] 
[INFO] --- versions-maven-plugin:2.4:use-latest-versions (default-cli) @ npefix ---
[INFO] Major version changes allowed
[INFO] artifact junit:junit: checking for updates from gforge.inria.fr-snapshot
[INFO] Updated junit:junit:jar:4.11 to version 4.13
[INFO] artifact org.json:json: checking for updates from gforge.inria.fr-snapshot
[INFO] artifact org.json:json: checking for updates from central
[INFO] Updated org.json:json:jar:20160212 to version 20190722
[INFO] artifact org.hamcrest:hamcrest-core: checking for updates from gforge.inria.fr-snapshot
[INFO] artifact org.hamcrest:hamcrest-core: checking for updates from central
[INFO] Updated org.hamcrest:hamcrest-core:jar:1.3 to version 2.2
[INFO] artifact fr.inria.gforge.spoon:spoon-core: checking for updates from gforge.inria.fr-snapshot
[INFO] Updated fr.inria.gforge.spoon:spoon-core:jar:7.5.0-SNAPSHOT to version 8.1.0-SNAPSHOT
[INFO] artifact org.slf4j:slf4j-simple: checking for updates from gforge.inria.fr-snapshot
[INFO] artifact org.slf4j:slf4j-simple: checking for updates from central
[INFO] Updated org.slf4j:slf4j-simple:jar:1.7.6 to version 2.0.0-alpha1
[INFO] artifact log4j:log4j: checking for updates from gforge.inria.fr-snapshot
[INFO] artifact log4j:log4j: checking for updates from central
[INFO] artifact com.cloudbees:diff4j: checking for updates from gforge.inria.fr-snapshot
[INFO] artifact com.cloudbees:diff4j: checking for updates from central
[INFO] Updated com.cloudbees:diff4j:jar:1.2 to version 1.3
[INFO] artifact org.eclipse.core:org.eclipse.core.runtime: checking for updates from gforge.inria.fr-snapshot
[INFO] artifact org.eclipse.core:org.eclipse.core.runtime: checking for updates from central
[INFO] Updated org.eclipse.core:org.eclipse.core.runtime:jar:3.6.0.v20100505 to version 3.7.0
[INFO] artifact org.eclipse.core:org.eclipse.core.resources: checking for updates from gforge.inria.fr-snapshot
[INFO] artifact org.eclipse.core:org.eclipse.core.resources: checking for updates from central
[INFO] Updated org.eclipse.core:org.eclipse.core.resources:jar:3.6.0.v20100526-0737 to version 3.7.100
[INFO] artifact org.glassfish.tyrus.bundles:tyrus-standalone-client: checking for updates from gforge.inria.fr-snapshot
[INFO] artifact org.glassfish.tyrus.bundles:tyrus-standalone-client: checking for updates from central
[INFO] Updated org.glassfish.tyrus.bundles:tyrus-standalone-client:jar:1.13.1 to version 1.15
[INFO] artifact org.apache.maven:maven-model: checking for updates from gforge.inria.fr-snapshot
[INFO] artifact org.apache.maven:maven-model: checking for updates from central
[INFO] Updated org.apache.maven:maven-model:jar:3.5.0 to version 3.6.3
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 4.583 s
[INFO] Finished at: 2020-02-06T05:24:09+01:00
[INFO] Final Memory: 23M/188M
[INFO] ------------------------------------------------------------------------
+ mvn test
Picked up JAVA_TOOL_OPTIONS: -Dfile.encoding=UTF8
[INFO] Scanning for projects...
[INFO] Inspecting build with total of 1 modules...
[INFO] Installing Nexus Staging features:
[INFO]   ... total of 1 executions of maven-deploy-plugin replaced with nexus-staging-maven-plugin
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building npefix 0.8-SNAPSHOT
[INFO] ------------------------------------------------------------------------
Downloading: http://maven.inria.fr/artifactory/spoon-public-snapshot/fr/inria/gforge/spoon/spoon-core/8.1.0-SNAPSHOT/maven-metadata.xml
[WARNING] Could not apply configuration for gforge.inria.fr-snapshot to wagon org.apache.maven.wagon.providers.http.HttpWagon:Cannot find 'preferredAuthentications' in class org.apache.maven.wagon.providers.http.HttpWagon
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Downloaded: http://maven.inria.fr/artifactory/spoon-public-snapshot/fr/inria/gforge/spoon/spoon-core/8.1.0-SNAPSHOT/maven-metadata.xml (1017 B at 7.3 KB/sec)
Downloading: http://maven.inria.fr/artifactory/spoon-public-snapshot/fr/inria/gforge/spoon/spoon-core/8.1.0-SNAPSHOT/spoon-core-8.1.0-20200205.234146-110.pom
[WARNING] Could not apply configuration for gforge.inria.fr-snapshot to wagon org.apache.maven.wagon.providers.http.HttpWagon:Cannot find 'preferredAuthentications' in class org.apache.maven.wagon.providers.http.HttpWagon
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Downloaded: http://maven.inria.fr/artifactory/spoon-public-snapshot/fr/inria/gforge/spoon/spoon-core/8.1.0-SNAPSHOT/spoon-core-8.1.0-20200205.234146-110.pom (8 KB at 252.3 KB/sec)
Downloading: http://maven.inria.fr/artifactory/spoon-public-snapshot/fr/inria/gforge/spoon/spoon-pom/1.0/spoon-pom-1.0.pom
[WARNING] Could not apply configuration for gforge.inria.fr-snapshot to wagon org.apache.maven.wagon.providers.http.HttpWagon:Cannot find 'preferredAuthentications' in class org.apache.maven.wagon.providers.http.HttpWagon
         
Downloading: https://repo.maven.apache.org/maven2/fr/inria/gforge/spoon/spoon-pom/1.0/spoon-pom-1.0.pom
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Downloaded: https://repo.maven.apache.org/maven2/fr/inria/gforge/spoon/spoon-pom/1.0/spoon-pom-1.0.pom (21 KB at 104.4 KB/sec)
Downloading: http://maven.inria.fr/artifactory/spoon-public-snapshot/fr/inria/gforge/spoon/spoon-core/8.1.0-SNAPSHOT/spoon-core-8.1.0-20200205.234146-110.jar
[WARNING] Could not apply configuration for gforge.inria.fr-snapshot to wagon org.apache.maven.wagon.providers.http.HttpWagon:Cannot find 'preferredAuthentications' in class org.apache.maven.wagon.providers.http.HttpWagon
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Downloaded: http://maven.inria.fr/artifactory/spoon-public-snapshot/fr/inria/gforge/spoon/spoon-core/8.1.0-SNAPSHOT/spoon-core-8.1.0-20200205.234146-110.jar (1699 KB at 5898.2 KB/sec)
[INFO] 
[INFO] --- jacoco-maven-plugin:0.7.5.201505241946:prepare-agent (default) @ npefix ---
[INFO] argLine set to -javaagent:/builds/.m2/repository/org/jacoco/org.jacoco.agent/0.7.5.201505241946/org.jacoco.agent-0.7.5.201505241946-runtime.jar=destfile=/builds/workspace/npefix/target/jacoco.exec
[INFO] 
[INFO] --- build-helper-maven-plugin:1.7:add-source (add-source) @ npefix ---
[INFO] Source directory: /builds/workspace/npefix/src/evaluation/java added.
[INFO] Source directory: /builds/workspace/npefix/src/main/java added.
[INFO] 
[INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ npefix ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 1 resource
[INFO] 
[INFO] --- maven-compiler-plugin:3.5.1:compile (default-compile) @ npefix ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 185 source files to /builds/workspace/npefix/target/classes
[INFO] /builds/workspace/npefix/src/main/java/fr/inria/spirals/npefix/main/all/Launcher.java: Some input files use or override a deprecated API.
[INFO] /builds/workspace/npefix/src/main/java/fr/inria/spirals/npefix/main/all/Launcher.java: Recompile with -Xlint:deprecation for details.
[INFO] /builds/workspace/npefix/src/main/java/fr/inria/spirals/npefix/transformer/processors/ProcessorUtility.java: Some input files use unchecked or unsafe operations.
[INFO] /builds/workspace/npefix/src/main/java/fr/inria/spirals/npefix/transformer/processors/ProcessorUtility.java: Recompile with -Xlint:unchecked for details.
[INFO] 
[INFO] --- maven-resources-plugin:2.6:testResources (default-testResources) @ npefix ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 9 resources
[INFO] 
[INFO] --- maven-compiler-plugin:3.5.1:testCompile (default-testCompile) @ npefix ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 17 source files to /builds/workspace/npefix/target/test-classes
[INFO] /builds/workspace/npefix/src/test/java/fr/inria/spirals/npefix/patch/PatchesGeneratorTest.java: Some input files use unchecked or unsafe operations.
[INFO] /builds/workspace/npefix/src/test/java/fr/inria/spirals/npefix/patch/PatchesGeneratorTest.java: Recompile with -Xlint:unchecked for details.
[INFO] 
[INFO] --- maven-surefire-plugin:2.17:test (default-test) @ npefix ---
[INFO] Surefire report directory: /builds/workspace/npefix/target/surefire-reports

-------------------------------------------------------
 T E S T S
-------------------------------------------------------
Picked up JAVA_TOOL_OPTIONS: -Dfile.encoding=UTF8
Running fr.inria.spirals.npefix.transformer.processors.ConstructorEncapsulationTest
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
ConstructorEncapsulation # Constructor: 2 in 50ms
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 3.206 sec - in fr.inria.spirals.npefix.transformer.processors.ConstructorEncapsulationTest
Running fr.inria.spirals.npefix.transformer.processors.ArrayAccessTest
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.854 sec - in fr.inria.spirals.npefix.transformer.processors.ArrayAccessTest
Running fr.inria.spirals.npefix.transformer.processors.BeforeDerefAdderTest
Tests run: 1, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.002 sec - in fr.inria.spirals.npefix.transformer.processors.BeforeDerefAdderTest
Running fr.inria.spirals.npefix.transformer.processors.TernarySplitterTest
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
TernarySplitter  in 10ms
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.239 sec - in fr.inria.spirals.npefix.transformer.processors.TernarySplitterTest
Running fr.inria.spirals.npefix.transformer.processors.ImplicitCastCheckerTest
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
AddImplicitCastChecker --> 4 in 10ms
BeforeDeref --> 31 (failed:0) in 44ms
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.585 sec - in fr.inria.spirals.npefix.transformer.processors.ImplicitCastCheckerTest
Running fr.inria.spirals.npefix.transformer.processors.CheckNotNullTest
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
java.lang.String local = (field == null) ? "" : field
return field == null ? "" : field
field = (parm == null) ? "" : parm
java.lang.Class type = (array != null) ? array.getClass() : element != null ? element.getClass() : java.lang.Object.class
java.lang.Class type = (array != null) ? array.getClass() : element != null ? element.getClass() : java.lang.Object.class
CheckNotNull  in 50ms
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.314 sec - in fr.inria.spirals.npefix.transformer.processors.CheckNotNullTest
Running fr.inria.spirals.npefix.transformer.processors.TargetModifierTest
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
target--> 29 (failed:0) in 35ms
public void multiCatch() {
    try {
    } catch (java.lang.IllegalArgumentException | java.lang.NullPointerException e) {
        e.printStackTrace();
    }
}
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.335 sec - in fr.inria.spirals.npefix.transformer.processors.TargetModifierTest
Running fr.inria.spirals.npefix.transformer.TryCatchRepairModelTest
/builds/workspace/npefix/target/test-classes/foo/src
RMI Selector (Host: 127.0.0.1, Port: 10000): KO
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
CheckNotNull  in 0ms
ForceNullInit in 0ms
AddImplicitCastChecker --> 0 in 1ms
Assign --> 0 (failed: 0) in 0ms
VarInit --> 0 in 0ms
TryCatchRepair # Method: 4 in 13ms
ConstructorTryCatchRepair # Constructor: 0 in 1ms
VariableFor in 1ms
ConeflowerTest#test1
	1 Strat4 NULL Coneflower:15 Used null
Status: Ko
ConeflowerTest#test2
	1 Strat4 NULL Coneflower:11 Used null
Status: Ko
ConeflowerTest#test3
	1 Strat4 NULL Coneflower:7 Used null
Status: Ko
Multirun 4/1500 0%
ConeflowerTest#test1
	1 Strat4 NULL Coneflower:11 Used null
Status: Ko
ConeflowerTest#test2
	1 Strat4 NULL Coneflower:7 Used null
Status: Ko
Multirun 8/1500 0%
ConeflowerTest#test1
	1 Strat4 NULL Coneflower:7 Used null
Status: Ko
Multirun 12/1500 0%
ConeflowerTest#testThrowException
	1 Strat4 VAR Coneflower:19 Used i
Status: Ok
Multirun 4/1500 0%
ConeflowerTest#test1
	1 Strat4 NEW Coneflower:15 Used java.lang.String()
Status: Ko
ConeflowerTest#test2
	1 Strat4 NEW Coneflower:11 Used java.lang.String()
Status: Ko
ConeflowerTest#test3
	1 Strat4 NEW Coneflower:7 Used java.lang.String()
Status: Ok
ConeflowerTest#testThrowException
	1 Strat4 NEW Coneflower:19 Used 0
Status: Ok
Multirun 4/1500 0%
ConeflowerTest#test1
	1 Strat4 NEW Coneflower:11 Used java.lang.String()
Status: Ko
ConeflowerTest#test2
	1 Strat4 NEW Coneflower:7 Used java.lang.String()
Status: Ok
ConeflowerTest#testThrowException
	1 Strat4 NEW Coneflower:19 Used -1
Status: Ko
Multirun 8/1500 0%
ConeflowerTest#test1
	1 Strat4 NEW Coneflower:7 Used java.lang.String()
Status: Ok
ConeflowerTest#testThrowException
	1 Strat4 NEW Coneflower:19 Used 1
Status: Ko
Multirun 12/1500 0%
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.969 sec - in fr.inria.spirals.npefix.transformer.TryCatchRepairModelTest
Running fr.inria.spirals.npefix.patchTemplate.ReplaceGlobalTest
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.439 sec - in fr.inria.spirals.npefix.patchTemplate.ReplaceGlobalTest
Running fr.inria.spirals.npefix.patchTemplate.VariableFinderTest
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
Tests run: 2, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.104 sec - in fr.inria.spirals.npefix.patchTemplate.VariableFinderTest
Running fr.inria.spirals.npefix.patchTemplate.SkipLineTest
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.146 sec - in fr.inria.spirals.npefix.patchTemplate.SkipLineTest
Running fr.inria.spirals.npefix.patchTemplate.SkipMethodReturnTest
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.43 sec - in fr.inria.spirals.npefix.patchTemplate.SkipMethodReturnTest
Running fr.inria.spirals.npefix.patchTemplate.ReplaceLocalTest
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.298 sec - in fr.inria.spirals.npefix.patchTemplate.ReplaceLocalTest
Running fr.inria.spirals.npefix.patch.PatchesGeneratorTest
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
--- a/target/test-classes/foo/src/main/java/Foo.java
+++ b/target/test-classes/foo/src/main/java/Foo.java
@@ -105,3 +105,7 @@
     public void  multiDecisionLine() {
-        Arrays.asList(field.toString(), field.toString());
+        if (field == null) {
+            Arrays.asList( new String().toString(), new String().toString());
+        } else {
+            Arrays.asList(field.toString(), field.toString());
+        }
     }

[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
--- a/target/test-classes/foo/src/main/java/Foo.java
+++ b/target/test-classes/foo/src/main/java/Foo.java
@@ -20,6 +20,8 @@
         String result = "";
-        for (String element : array) {
-            result += element.toString();
-            if(element == null) {
-                return null;
+        if (array != null) {
+            for (String element : array) {
+                result += element.toString();
+                if(element == null) {
+                    return null;
+                }
             }

[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
--- a/src/main/java/Foo.java
+++ b/src/main/java/Foo.java
@@ -20,2 +20,5 @@
         String result = "";
+        if (array == null) {
+            return new Object();
+        }
         for (String element : array) {

[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
--- a/target/test-classes/foo/src/main/java/Foo.java
+++ b/target/test-classes/foo/src/main/java/Foo.java
@@ -111,4 +111,12 @@
 
-        } else if (array[0].isEmpty()) {
-
+        } else {
+            if (array[0] == null) {
+                if ( new String().isEmpty()) {
+                    
+                }
+            } else {
+                if (array[0].isEmpty()) {
+                    
+                }
+            }
         }

[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
--- a/target/test-classes/foo/src/main/java/Foo.java
+++ b/target/test-classes/foo/src/main/java/Foo.java
@@ -20,2 +20,5 @@
         String result = "";
+        if (array == null) {
+            return new Object();
+        }
         for (String element : array) {

[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
--- a/target/test-classes/foo/src/main/java/Foo.java
+++ b/target/test-classes/foo/src/main/java/Foo.java
@@ -20,2 +20,5 @@
         String result = "";
+        if (array == null) {
+            return result;
+        }
         for (String element : array) {
@@ -30,3 +33,5 @@
     public String fooLocal() {
-        System.out.print(field.toLowerCase());
+        if (field != null) {
+            System.out.print(field.toLowerCase());
+        }
         if(field == null) {

[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
--- a/target/test-classes/foo/src/main/java/Foo.java
+++ b/target/test-classes/foo/src/main/java/Foo.java
@@ -20,7 +20,16 @@
         String result = "";
-        for (String element : array) {
-            result += element.toString();
-            if(element == null) {
-                return null;
+        if (array == null) {
+            for (String element : result) {
+                result += element.toString();
+                if(element == null) {
+                    return null;
+                }
             }
+        } else {
+            for (String element : array) {
+                result += element.toString();
+                if(element == null) {
+                    return null;
+                }
+            }
         }

[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
--- a/target/test-classes/foo/src/main/java/Foo.java
+++ b/target/test-classes/foo/src/main/java/Foo.java
@@ -20,7 +20,16 @@
         String result = "";
-        for (String element : array) {
-            result += element.toString();
-            if(element == null) {
-                return null;
+        if (array == null) {
+            for (String element : new String[0]) {
+                result += element.toString();
+                if(element == null) {
+                    return null;
+                }
             }
+        } else {
+            for (String element : array) {
+                result += element.toString();
+                if(element == null) {
+                    return null;
+                }
+            }
         }

[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
--- a/target/test-classes/foo/src/main/java/Foo.java
+++ b/target/test-classes/foo/src/main/java/Foo.java
@@ -20,2 +20,5 @@
         String result = "";
+        if (array == null) {
+            array = new String[0];
+        }
         for (String element : array) {

Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.245 sec - in fr.inria.spirals.npefix.patch.PatchesGeneratorTest
Running fr.inria.spirals.npefix.main.all.LauncherTest
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
TernarySplitter  in 5ms
type = (element != null) ? element.getClass() : Object.class
CheckNotNull  in 12ms
ForceNullInit in 2ms
AddImplicitCastChecker --> 4 in 3ms
BeforeDeref --> 29 (failed:0) in 13ms
target--> 32 (failed:0) in 30ms
TryRegister # Try: 1 in 14ms
Assign --> 19 (failed: 0) in 24ms
VarInit --> 10 in 8ms
MethodEncapsulation # Method: 28 in 63ms
ConstructorEncapsulation # Constructor: 2 in 10ms
VariableFor in 6ms
NoStrat
FooArrayAccessTest#fooTest1
<No Strat> Status: Ko
FooArrayAccessTest#fooTest2
<No Strat> Status: Ko
FooArrayAccessTest#fooTest
<No Strat> Status: Ko
FooClassTest#foo1Test
<No Strat> Status: Ko
FooClassTest#fooLocalTest
<No Strat> Status: Ko
FooClassTest#fooGlobalTest
<No Strat> Status: Ko
FooClassTest#fooVariableLocalTest
<No Strat> Status: Ko
FooClassTest#fooVariableGlobalTest
<No Strat> Status: Ko
FooClassTest#returnVoidTest
<No Strat> Status: Ko
FooClassTest#fooTest
<No Strat> Status: Ko
Strat1A
FooArrayAccessTest#fooTest1
<No Strat> Status: Ko
FooArrayAccessTest#fooTest2
<No Strat> Status: Ko
FooArrayAccessTest#fooTest
<No Strat> Status: Ko
FooClassTest#foo1Test
	1 Strat1A Foo:21 result
Status: Ko
FooClassTest#fooLocalTest
<No Strat> Status: Ko
FooClassTest#fooGlobalTest
<No Strat> Status: Ko
FooClassTest#fooVariableLocalTest
	1 Strat1A Foo:49 Used empty
Status: Ko
FooClassTest#fooVariableGlobalTest
	1 Strat1A Foo:58 Used empty
Status: Ok
FooClassTest#returnVoidTest
<No Strat> Status: Ko
FooClassTest#fooTest
<No Strat> Status: Ko
Strat1B
FooArrayAccessTest#fooTest1
<No Strat> Status: Ko
FooArrayAccessTest#fooTest2
<No Strat> Status: Ko
FooArrayAccessTest#fooTest
<No Strat> Status: Ko
FooClassTest#foo1Test
	1 Strat1B Foo:21 result
Status: Ko
FooClassTest#fooLocalTest
<No Strat> Status: Ko
FooClassTest#fooGlobalTest
<No Strat> Status: Ko
FooClassTest#fooVariableLocalTest
	1 Strat1B Foo:49 Used empty
Status: Ko
FooClassTest#fooVariableGlobalTest
	1 Strat1B Foo:58 Used empty
Status: Ok
FooClassTest#returnVoidTest
<No Strat> Status: Ko
FooClassTest#fooTest
<No Strat> Status: Ko
Strat2A
FooArrayAccessTest#fooTest1
<No Strat> Status: Ko
FooArrayAccessTest#fooTest2
<No Strat> Status: Ko
FooArrayAccessTest#fooTest
<No Strat> Status: Ko
FooClassTest#foo1Test
	1 Strat2A Foo:21 java.lang.Object()
Status: Ko
FooClassTest#fooLocalTest
	1 Strat2A Foo:31 Used java.lang.String()
Status: Ok
FooClassTest#fooGlobalTest
	1 Strat2A Foo:31 Used java.lang.String()
Status: Ko
FooClassTest#fooVariableLocalTest
	1 Strat2A Foo:49 Used java.lang.String()
Status: Ko
FooClassTest#fooVariableGlobalTest
	1 Strat2A Foo:58 Used java.lang.String()
Status: Ko
FooClassTest#returnVoidTest
	1 Strat2A Foo:67 Used java.lang.String()
Status: Ok
FooClassTest#fooTest
	1 Strat2A Foo:16 Used java.lang.String()
Status: Ok
Strat2B
FooArrayAccessTest#fooTest1
<No Strat> Status: Ko
FooArrayAccessTest#fooTest2
<No Strat> Status: Ko
FooArrayAccessTest#fooTest
<No Strat> Status: Ko
FooClassTest#foo1Test
	1 Strat2B Foo:21 java.lang.Object()
Status: Ko
FooClassTest#fooLocalTest
	1 Strat2B Foo:31 Used java.lang.String()
Status: Ko
FooClassTest#fooGlobalTest
	1 Strat2B Foo:31 Used java.lang.String()
Status: Ok
FooClassTest#fooVariableLocalTest
	1 Strat2B Foo:49 Used java.lang.String()
Status: Ko
FooClassTest#fooVariableGlobalTest
	1 Strat2B Foo:58 Used java.lang.String()
Status: Ko
FooClassTest#returnVoidTest
	1 Strat2B Foo:67 Used java.lang.String()
Status: Ok
FooClassTest#fooTest
	1 Strat2B Foo:16 Used java.lang.String()
Status: Ok
Strat3
FooArrayAccessTest#fooTest1
<No Strat> Status: Ko
FooArrayAccessTest#fooTest2
<No Strat> Status: Ko
FooArrayAccessTest#fooTest
<No Strat> Status: Ko
FooClassTest#foo1Test
	1 Strat3 Foo:21 Used false
Status: Ok
FooClassTest#fooLocalTest
	1 Strat3 Foo:31 Used false
Status: Ok
FooClassTest#fooGlobalTest
	1 Strat3 Foo:31 Used false
Status: Ko
FooClassTest#fooVariableLocalTest
	1 Strat3 Foo:49 Used false
Status: Ok
FooClassTest#fooVariableGlobalTest
	1 Strat3 Foo:58 Used false
Status: Ko
FooClassTest#returnVoidTest
	1 Strat3 Foo:67 Used false
Status: Ok
FooClassTest#fooTest
	1 Strat3 Foo:16 Used false
Status: Ok
Strat4 NULL
FooArrayAccessTest#fooTest1
<No Strat> Status: Ko
FooArrayAccessTest#fooTest2
<No Strat> Status: Ko
FooArrayAccessTest#fooTest
<No Strat> Status: Ko
FooClassTest#foo1Test
	1 Strat4 NULL Foo:21 Used null
Status: Ok
FooClassTest#fooLocalTest
	1 Strat4 NULL Foo:31 Used null
Status: Ko
FooClassTest#fooGlobalTest
	1 Strat4 NULL Foo:31 Used null
Status: Ko
FooClassTest#fooVariableLocalTest
	1 Strat4 NULL Foo:49 Used null
Status: Ko
FooClassTest#fooVariableGlobalTest
	1 Strat4 NULL Foo:58 Used null
Status: Ko
FooClassTest#returnVoidTest
<No Strat> Status: Ko
FooClassTest#fooTest
<No Strat> Status: Ko
Strat4 VAR
FooArrayAccessTest#fooTest1
<No Strat> Status: Ko
FooArrayAccessTest#fooTest2
<No Strat> Status: Ko
FooArrayAccessTest#fooTest
<No Strat> Status: Ko
FooClassTest#foo1Test
	1 Strat4 VAR Foo:21 Used result
Status: Ok
FooClassTest#fooLocalTest
<No Strat> Status: Ko
FooClassTest#fooGlobalTest
<No Strat> Status: Ko
FooClassTest#fooVariableLocalTest
	1 Strat4 VAR Foo:49 Used empty
Status: Ko
FooClassTest#fooVariableGlobalTest
	1 Strat4 VAR Foo:58 Used empty
Status: Ko
FooClassTest#returnVoidTest
<No Strat> Status: Ko
FooClassTest#fooTest
<No Strat> Status: Ko
Strat4 NEW
FooArrayAccessTest#fooTest1
<No Strat> Status: Ko
FooArrayAccessTest#fooTest2
<No Strat> Status: Ko
FooArrayAccessTest#fooTest
<No Strat> Status: Ko
FooClassTest#foo1Test
	1 Strat4 NEW Foo:21 Used java.lang.Object()
Status: Ok
FooClassTest#fooLocalTest
	1 Strat4 NEW Foo:31 Used java.lang.String()
Status: Ko
FooClassTest#fooGlobalTest
	1 Strat4 NEW Foo:31 Used java.lang.String()
Status: Ok
FooClassTest#fooVariableLocalTest
	1 Strat4 NEW Foo:49 Used java.lang.String()
Status: Ko
FooClassTest#fooVariableGlobalTest
	1 Strat4 NEW Foo:58 Used java.lang.String()
Status: Ko
FooClassTest#returnVoidTest
<No Strat> Status: Ko
FooClassTest#fooTest
<No Strat> Status: Ko
Strat4 VOID
FooArrayAccessTest#fooTest1
<No Strat> Status: Ko
FooArrayAccessTest#fooTest2
<No Strat> Status: Ko
FooArrayAccessTest#fooTest
<No Strat> Status: Ko
FooClassTest#foo1Test
<No Strat> Status: Ko
FooClassTest#fooLocalTest
<No Strat> Status: Ko
FooClassTest#fooGlobalTest
<No Strat> Status: Ko
FooClassTest#fooVariableLocalTest
<No Strat> Status: Ko
FooClassTest#fooVariableGlobalTest
<No Strat> Status: Ko
FooClassTest#returnVoidTest
	1 Strat4 VOID Foo:67 Used null
Status: Ok
FooClassTest#fooTest
	1 Strat4 VOID Foo:16 Used null
Status: Ok
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
TernarySplitter  in 3ms
type = (element != null) ? element.getClass() : Object.class
CheckNotNull  in 16ms
ForceNullInit in 2ms
AddImplicitCastChecker --> 4 in 3ms
BeforeDeref --> 29 (failed:0) in 11ms
target--> 32 (failed:0) in 25ms
TryRegister # Try: 1 in 6ms
Assign --> 19 (failed: 0) in 18ms
VarInit --> 10 in 6ms
MethodEncapsulation # Method: 52 in 73ms
ConstructorEncapsulation # Constructor: 2 in 7ms
VariableFor in 3ms
ArrayReadReturnNull
FooArrayAccessTest#fooTest1
<No Strat> Status: Ko
FooArrayAccessTest#fooTest2
<No Strat> Status: Ko
FooArrayAccessTest#fooTest
<No Strat> Status: Ko
FooClassTest#foo1Test
	1 ArrayReadReturnNull Foo:21 null
Status: Ko
FooClassTest#fooLocalTest
	1 ArrayReadReturnNull Foo:31 null
Status: Ko
FooClassTest#fooGlobalTest
	1 ArrayReadReturnNull Foo:31 null
Status: Ko
FooClassTest#fooVariableLocalTest
	1 ArrayReadReturnNull Foo:49 null
Status: Ko
FooClassTest#fooVariableGlobalTest
	1 ArrayReadReturnNull Foo:58 null
Status: Ko
FooClassTest#returnVoidTest
	1 ArrayReadReturnNull Foo:67 null
Status: Ko
FooClassTest#fooTest
	1 ArrayReadReturnNull Foo:16 null
Status: Ko
[main] WARN spoon.Launcher - Spoon is now using the 'no classpath mode' by default. If you want to ensure using Spoon in full classpath mode, please use the new flag: --cpmode fullclasspath.
[main] WARN spoon.Launcher - Spoon now parses by default the comments. Consider using the option --disable-comments if you want the old behaviour.
TernarySplitter  in 3ms
type = (element != null) ? element.getClass() : Object.class
CheckNotNull  in 7ms
ForceNullInit in 1ms
AddImplicitCastChecker --> 4 in 3ms
BeforeDeref --> 29 (failed:0) in 9ms
target--> 32 (failed:0) in 19ms
TryRegister # Try: 1 in 14ms
Assign --> 19 (failed: 0) in 16ms
VarInit --> 10 in 5ms
MethodEncapsulation # Method: 76 in 65ms
ConstructorEncapsulation # Constructor: 2 in 6ms
VariableFor in 3ms
Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.992 sec - in fr.inria.spirals.npefix.main.all.LauncherTest

Results :

Tests run: 29, Failures: 0, Errors: 0, Skipped: 2

[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 21.281 s
[INFO] Finished at: 2020-02-06T05:24:32+01:00
[INFO] Final Memory: 29M/215M
[INFO] ------------------------------------------------------------------------
No mail will be sent out, as 'npefix #1103' does not have a result yet. Please make sure you set a proper result in case of pipeline/build scripts.
Finished: SUCCESS